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Q6DI32 (Q6DI32_DANRE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 69. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length399 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Binary interactions

With

Entry

#Exp.

IntAct

Notes

Mib1Q80SY44EBI-8574974,EBI-645227From a different organism.

Sequences

Sequence LengthMass (Da)Tools
Q6DI32 [UniParc].

Last modified August 16, 2004. Version 1.
Checksum: 03B8EFF4A18A3771

FASTA39945,934
        10         20         30         40         50         60 
MTSISEDSDK EKARSVSVDL NNDASLLIDI PDALCERDKV KFTVHTKTTL SSFQKPDFSV 

        70         80         90        100        110        120 
PRQHEDFIWL HDAIVETEEY AGLIIPPAPP KPDFEGPREK MHKLGEGESS MTKEEYAKMK 

       130        140        150        160        170        180 
QELEAEYLAV FKKTVQVHEV FLQRLSSHPS FSKDRNFHIF LEYDQDLSVR RKNAKEMFGG 

       190        200        210        220        230        240 
FFKNMVKTAD EVLISGVKEV DEFFEQEKTF LLDYSNKIKD STAKAEKMTR SHKNVADDYN 

       250        260        270        280        290        300 
HISGALNSVA ADNNSAFKKH LEKCVEVFEK LRKVEDRVAS DQELKLTELL RYYTRDIQAA 

       310        320        330        340        350        360 
KDLLYRRARA LADYENSNKA LDKARLKGKD VPQAEENQKQ CLQKFDRLSE SGKKELTSFK 

       370        380        390 
ARRVVAFRKN LIEMTELEIK HAKNSMSTLQ GSIELLKSN 

« Hide

References

« Hide 'large scale' references
[1]NIH - Zebrafish Gene Collection (ZGC) project
Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Embryo EMBL AAH75758.1.
[2]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: Tuebingen Ensembl ENSDARP00000018231.
[3]"The zebrafish reference genome sequence and its relationship to the human genome."
Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J. expand/collapse author list , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Tuebingen Ensembl ENSDARP00000018231.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
BX005372 Genomic DNA. No translation available.
BC075758 mRNA. Translation: AAH75758.1.
UniGeneDr.6495.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

MINTMINT-2841455.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSDART00000020350; ENSDARP00000018231; ENSDARG00000020442.

Organism-specific databases

ZFINZDB-GENE-040426-2857. snx5.

Phylogenomic databases

GeneTreeENSGT00740000115413.
HOVERGENHBG000716.
InParanoidQ6DI32.
OMAIKDSCAK.
OrthoDBEOG7X0VH4.
TreeFamTF313698.

Family and domain databases

Gene3D3.30.1520.10. 1 hit.
InterProIPR001683. Phox.
IPR028654. SNX5.
IPR014637. SNX5/SNX6/SNX32.
IPR015404. Vps5_C.
[Graphical view]
PANTHERPTHR10555:SF6. PTHR10555:SF6. 1 hit.
PfamPF00787. PX. 1 hit.
PF09325. Vps5. 1 hit.
[Graphical view]
PIRSFPIRSF036924. Snx5_Snx6. 1 hit.
SUPFAMSSF64268. SSF64268. 1 hit.
PROSITEPS50195. PX. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROQ6DI32.

Entry information

Entry nameQ6DI32_DANRE
AccessionPrimary (citable) accession number: Q6DI32
Entry history
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: June 11, 2014
This is version 69 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)