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Q6DHN4

- Q6DHN4_DANRE

UniProt

Q6DHN4 - Q6DHN4_DANRE

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Protein
Submitted name:

Acyl-CoA synthetase short-chain family member 2

Gene

acss2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_241504. Ethanol oxidation.

Names & Taxonomyi

Protein namesi
Submitted name:
Acyl-CoA synthetase short-chain family member 2Imported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:acss2Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
ProteomesiUP000000437: Chromosome 23

Organism-specific databases

ZFINiZDB-GENE-040718-388. acss2.

Interactioni

Protein-protein interaction databases

STRINGi7955.ENSDARP00000055053.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0365.
GeneTreeiENSGT00760000119178.
HOGENOMiHOG000229981.
HOVERGENiHBG014401.
KOiK01895.

Family and domain databases

InterProiIPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view]
PfamiPF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view]
PROSITEiPS00455. AMP_BINDING. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6DHN4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MCWHSLIGGA SEECEPVWCD SEDPLFILYT SGSTGKPKGV LHTVSGYMLY
60 70 80 90 100
TASTFKMVFD YHSDDVYWCT ADIGWITGHS YITYGPLANG ATSVLFEGLP
110 120 130 140 150
TYPDVSRMWE IVDKYHVSKF YTAPTAIRLL MKYGSDPVHK YKRTSLKILG
160 170 180 190 200
TVGEPINPEA WQWYYNVVGE KRCPVVDTFW QTETGGHVMT PLPAATPMKP
210 220 230 240 250
GSATFPFFGV VPAILNESGE ELEGPSEGYL VFKQPWPGVM RTVYGNHLRF
260 270 280 290 300
ETTYFKKFPG YYVTGDGCRR DKDGYYWITG RIDDMLNVSG HLLSTAEVES
310 320 330 340 350
ALVEHEAVAE AAVVGRPHPV KGESLYCFVT LNDGINYNQK LEAELKKQVR
360 370 380 390 400
EKIGAIATPD YIQNAPGLPK TRSGKIMRRV LRKIACNERD LGDVSTLADS
410
SVIEHLFENR CYTAV
Length:415
Mass (Da):46,450
Last modified:August 16, 2004 - v1
Checksum:i29A03AB1D3B2A0E0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT027560 Genomic DNA. No translation available.
CU137717 Genomic DNA. No translation available.
BC075933 mRNA. Translation: AAH75933.1.
RefSeqiNP_001002641.1. NM_001002641.1.
UniGeneiDr.75329.

Genome annotation databases

EnsembliENSDART00000055054; ENSDARP00000055053; ENSDARG00000037781.
GeneIDi436914.
KEGGidre:436914.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CT027560 Genomic DNA. No translation available.
CU137717 Genomic DNA. No translation available.
BC075933 mRNA. Translation: AAH75933.1 .
RefSeqi NP_001002641.1. NM_001002641.1.
UniGenei Dr.75329.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 7955.ENSDARP00000055053.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSDART00000055054 ; ENSDARP00000055053 ; ENSDARG00000037781 .
GeneIDi 436914.
KEGGi dre:436914.

Organism-specific databases

CTDi 55902.
ZFINi ZDB-GENE-040718-388. acss2.

Phylogenomic databases

eggNOGi COG0365.
GeneTreei ENSGT00760000119178.
HOGENOMi HOG000229981.
HOVERGENi HBG014401.
KOi K01895.

Enzyme and pathway databases

Reactomei REACT_241504. Ethanol oxidation.

Miscellaneous databases

NextBioi 20831341.

Family and domain databases

InterProi IPR025110. AMP-bd_C.
IPR020845. AMP-binding_CS.
IPR000873. AMP-dep_Synth/Lig.
[Graphical view ]
Pfami PF00501. AMP-binding. 1 hit.
PF13193. AMP-binding_C. 1 hit.
[Graphical view ]
PROSITEi PS00455. AMP_BINDING. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. NIH - Zebrafish Gene Collection (ZGC) project
    Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: WholeImported.
  2. Ensembl
    Submitted (FEB-2012) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: TuebingenImported.
  3. "The zebrafish reference genome sequence and its relationship to the human genome."
    Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
    , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
    Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TuebingenImported.

Entry informationi

Entry nameiQ6DHN4_DANRE
AccessioniPrimary (citable) accession number: Q6DHN4
Entry historyi
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: November 26, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3