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Q6DHN4

- Q6DHN4_DANRE

UniProt

Q6DHN4 - Q6DHN4_DANRE

Protein
Submitted name:

Acyl-CoA synthetase short-chain family member 2

Gene

acss2

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 72 (01 Oct 2014)
      Sequence version 1 (16 Aug 2004)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. catalytic activity Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Acyl-CoA synthetase short-chain family member 2Imported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:acss2Imported
    OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
    Taxonomic identifieri7955 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
    ProteomesiUP000000437: Chromosome 23

    Organism-specific databases

    ZFINiZDB-GENE-040718-388. acss2.

    Interactioni

    Protein-protein interaction databases

    STRINGi7955.ENSDARP00000055053.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0365.
    GeneTreeiENSGT00750000117658.
    HOGENOMiHOG000229981.
    HOVERGENiHBG014401.
    KOiK01895.

    Family and domain databases

    InterProiIPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view]
    PfamiPF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view]
    PROSITEiPS00455. AMP_BINDING. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Q6DHN4-1 [UniParc]FASTAAdd to Basket

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    MCWHSLIGGA SEECEPVWCD SEDPLFILYT SGSTGKPKGV LHTVSGYMLY    50
    TASTFKMVFD YHSDDVYWCT ADIGWITGHS YITYGPLANG ATSVLFEGLP 100
    TYPDVSRMWE IVDKYHVSKF YTAPTAIRLL MKYGSDPVHK YKRTSLKILG 150
    TVGEPINPEA WQWYYNVVGE KRCPVVDTFW QTETGGHVMT PLPAATPMKP 200
    GSATFPFFGV VPAILNESGE ELEGPSEGYL VFKQPWPGVM RTVYGNHLRF 250
    ETTYFKKFPG YYVTGDGCRR DKDGYYWITG RIDDMLNVSG HLLSTAEVES 300
    ALVEHEAVAE AAVVGRPHPV KGESLYCFVT LNDGINYNQK LEAELKKQVR 350
    EKIGAIATPD YIQNAPGLPK TRSGKIMRRV LRKIACNERD LGDVSTLADS 400
    SVIEHLFENR CYTAV 415
    Length:415
    Mass (Da):46,450
    Last modified:August 16, 2004 - v1
    Checksum:i29A03AB1D3B2A0E0
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT027560 Genomic DNA. No translation available.
    CU137717 Genomic DNA. No translation available.
    BC075933 mRNA. Translation: AAH75933.1.
    RefSeqiNP_001002641.1. NM_001002641.1.
    UniGeneiDr.75329.

    Genome annotation databases

    EnsembliENSDART00000055054; ENSDARP00000055053; ENSDARG00000037781.
    GeneIDi436914.
    KEGGidre:436914.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CT027560 Genomic DNA. No translation available.
    CU137717 Genomic DNA. No translation available.
    BC075933 mRNA. Translation: AAH75933.1 .
    RefSeqi NP_001002641.1. NM_001002641.1.
    UniGenei Dr.75329.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 7955.ENSDARP00000055053.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSDART00000055054 ; ENSDARP00000055053 ; ENSDARG00000037781 .
    GeneIDi 436914.
    KEGGi dre:436914.

    Organism-specific databases

    CTDi 55902.
    ZFINi ZDB-GENE-040718-388. acss2.

    Phylogenomic databases

    eggNOGi COG0365.
    GeneTreei ENSGT00750000117658.
    HOGENOMi HOG000229981.
    HOVERGENi HBG014401.
    KOi K01895.

    Miscellaneous databases

    NextBioi 20831341.

    Family and domain databases

    InterProi IPR025110. AMP-bd_C.
    IPR020845. AMP-binding_CS.
    IPR000873. AMP-dep_Synth/Lig.
    [Graphical view ]
    Pfami PF00501. AMP-binding. 1 hit.
    PF13193. AMP-binding_C. 1 hit.
    [Graphical view ]
    PROSITEi PS00455. AMP_BINDING. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. NIH - Zebrafish Gene Collection (ZGC) project
      Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: WholeImported.
    2. Ensembl
      Submitted (FEB-2012) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: TuebingenImported.
    3. "The zebrafish reference genome sequence and its relationship to the human genome."
      Howe K., Clark M.D., Torroja C.F., Torrance J., Berthelot C., Muffato M., Collins J.E., Humphray S., McLaren K., Matthews L., McLaren S., Sealy I., Caccamo M., Churcher C., Scott C., Barrett J.C., Koch R., Rauch G.J.
      , White S., Chow W., Kilian B., Quintais L.T., Guerra-Assuncao J.A., Zhou Y., Gu Y., Yen J., Vogel J.H., Eyre T., Redmond S., Banerjee R., Chi J., Fu B., Langley E., Maguire S.F., Laird G.K., Lloyd D., Kenyon E., Donaldson S., Sehra H., Almeida-King J., Loveland J., Trevanion S., Jones M., Quail M., Willey D., Hunt A., Burton J., Sims S., McLay K., Plumb B., Davis J., Clee C., Oliver K., Clark R., Riddle C., Eliott D., Threadgold G., Harden G., Ware D., Mortimer B., Kerry G., Heath P., Phillimore B., Tracey A., Corby N., Dunn M., Johnson C., Wood J., Clark S., Pelan S., Griffiths G., Smith M., Glithero R., Howden P., Barker N., Stevens C., Harley J., Holt K., Panagiotidis G., Lovell J., Beasley H., Henderson C., Gordon D., Auger K., Wright D., Collins J., Raisen C., Dyer L., Leung K., Robertson L., Ambridge K., Leongamornlert D., McGuire S., Gilderthorp R., Griffiths C., Manthravadi D., Nichol S., Barker G., Whitehead S., Kay M., Brown J., Murnane C., Gray E., Humphries M., Sycamore N., Barker D., Saunders D., Wallis J., Babbage A., Hammond S., Mashreghi-Mohammadi M., Barr L., Martin S., Wray P., Ellington A., Matthews N., Ellwood M., Woodmansey R., Clark G., Cooper J., Tromans A., Grafham D., Skuce C., Pandian R., Andrews R., Harrison E., Kimberley A., Garnett J., Fosker N., Hall R., Garner P., Kelly D., Bird C., Palmer S., Gehring I., Berger A., Dooley C.M., Ersan-Urun Z., Eser C., Geiger H., Geisler M., Karotki L., Kirn A., Konantz J., Konantz M., Oberlander M., Rudolph-Geiger S., Teucke M., Osoegawa K., Zhu B., Rapp A., Widaa S., Langford C., Yang F., Carter N.P., Harrow J., Ning Z., Herrero J., Searle S.M., Enright A., Geisler R., Plasterk R.H., Lee C., Westerfield M., de Jong P.J., Zon L.I., Postlethwait J.H., Nusslein-Volhard C., Hubbard T.J., Roest Crollius H., Rogers J., Stemple D.L.
      Nature 496:498-503(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TuebingenImported.

    Entry informationi

    Entry nameiQ6DHN4_DANRE
    AccessioniPrimary (citable) accession number: Q6DHN4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 16, 2004
    Last sequence update: August 16, 2004
    Last modified: October 1, 2014
    This is version 72 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3