Q6DHE9 (Q6DHE9_DANRE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Claudin 15-like b Ensembl ENSDARP00000089758

Submitted name:
Zgc:92349 EMBL AAH76025.1

Gene names

Name:	cldn10l1b ZFIN ZDB-GENE-040718-145
Synonyms:	cldn15lb Ensembl ENSDARP00000089758
ORF Names:	zgc:92349 ZFIN ZDB-GENE-040718-145

Organism

Danio rerio (Zebrafish) (Brachydanio rerio) EMBL AAH76025.1

Taxonomic identifier

7955 [NCBI]

Taxonomic lineage

Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Actinopterygii › Neopterygii › Teleostei › Ostariophysi › Cypriniformes › Cyprinidae › Danio

Protein attributes

Sequence length	219 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Cellular component	Cell junction Cell membrane SAAS SAAS006187 Membrane Tight junction SAAS SAAS006187
Domain	Transmembrane Transmembrane helix SAAS SAAS006187
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Cellular component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW tight junction Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	structural molecule activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6DHE9 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 9198D70642881633	FASTA	219	23,033
	10 20 30 40 50 60 MVLQVLGLFL GIVGWCLESS SINSSVWKSS SHGEAVVTAS SQFEGLWFSC ASNSLGAIHC 70 80 90 100 110 120 QRFKTTLGLP GYIQACRALM IIALILGLLS VVLASMGLKC TKLGSTSEEA KGKISLTAGI 130 140 150 160 170 180 MFILSGLCVI VAVSWYAARV VQEFNDPFYG GTKYELGAGL YLGWAAAALC ILGGGTLCTS 190 200 210 FKGSSPAQTR GPGYNYSAAQ PQKIYRSAPS DNSITKAYV

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	NIH - Zebrafish Gene Collection (ZGC) project Submitted (JUL-2004) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Whole EMBL AAH76025.1.
[2]	"The genomic sequence of Danio rerio." The Danio rerio Sequencing Project at the Sanger Institute Submitted (JUL-2010) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Tuebingen Ensembl ENSDARP00000089758.
[3]	Ensembl Submitted (JUL-2011) to UniProtKB Cited for: IDENTIFICATION. Strain: Tuebingen Ensembl ENSDARP00000089758.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CABZ01067239 Genomic DNA. No translation available. CABZ01067240 Genomic DNA. No translation available. CABZ01067241 Genomic DNA. No translation available. CABZ01067242 Genomic DNA. No translation available. CABZ01067243 Genomic DNA. No translation available. BC076025 mRNA. Translation: AAH76025.1.
IPI	IPI00482703.
UniGene	Dr.82532.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
Ensembl	ENSDART00000098987; ENSDARP00000089758; ENSDARG00000038372.
KEGG	dre:436719.
Organism-specific databases
CTD	436719.
ZFIN	ZDB-GENE-040718-145. cldn15lb.
Phylogenomic databases
eggNOG	fiNOG16132.
GeneTree	ENSGT00600000084022.
HOGENOM	HBG716859.
HOVERGEN	HBG000643.
OrthoDB	EOG469QW8.
Gene expression databases
Bgee	Q6DHE9.
Family and domain databases
InterPro	IPR006187. Claudin. IPR017974. Claudin_CS. IPR004031. PMP22/EMP/MP20/Claudin. [Graphical view]
KO	K06087.
PANTHER	PTHR12002. Claudin. 1 hit.
Pfam	PF00822. PMP22_Claudin. 1 hit. [Graphical view]
PRINTS	PR01077. CLAUDIN.
PROSITE	PS01346. CLAUDIN. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6DHE9_DANRE

Accession

Primary (citable) accession number: Q6DHE9

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	January 25, 2012
This is version 55 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)