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Protein
Submitted name:

Zgc:92912

Gene

zgc:92912

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Zgc:92912Imported
Submitted name:
Zgc:92912 proteinImported
Gene namesi
ORF Names:zgc:92912Imported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio
Proteomesi
  • UP000000437 Componenti: Chromosome 16

Organism-specific databases

ZFINiZDB-GENE-040718-265. zgc:92912.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei97 – 117HelicalSequence analysisAdd BLAST21

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSDARG00000097576.

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliQ6DGI1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini33 – 93V-SNARE coiled-coil homologyInterPro annotationAdd BLAST61

Keywords - Domaini

Coiled coilSAAS annotation, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00550000074449.
HOVERGENiHBG006675.
KOiK08510.
OMAiWKNCKVE.
OrthoDBiEOG091G0MPE.

Family and domain databases

InterProiView protein in InterPro
IPR001388. Synaptobrevin.
PfamiView protein in Pfam
PF00957. Synaptobrevin. 1 hit.
PRINTSiPR00219. SYNAPTOBREVN.
PROSITEiView protein in PROSITE
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6DGI1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAADDANPA GAPGGPGGAG APAPPPNTTS NRRLQQTQAQ VEEVVDIMRV
60 70 80 90 100
NVDKVLERDQ KLSELDDRAD ALQAGASQFE SCAAKLKNKY WWKNCKMMII
110
MGVIGVLFVG IIFLYFFS
Length:118
Mass (Da):12,760
Last modified:August 16, 2004 - v1
Checksum:i31D5C120E91DF14C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU104697 Genomic DNA. No translation available.
BC076364 mRNA. Translation: AAH76364.1.
BC165163 mRNA. Translation: AAI65163.1.
RefSeqiNP_001002532.1. NM_001002532.1.
UniGeneiDr.88019.

Genome annotation databases

EnsembliENSDART00000154253; ENSDARP00000129602; ENSDARG00000097576.
GeneIDi436805.
KEGGidre:436805.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU104697 Genomic DNA. No translation available.
BC076364 mRNA. Translation: AAH76364.1.
BC165163 mRNA. Translation: AAI65163.1.
RefSeqiNP_001002532.1. NM_001002532.1.
UniGeneiDr.88019.

3D structure databases

ProteinModelPortaliQ6DGI1.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSDART00000154253; ENSDARP00000129602; ENSDARG00000097576.
GeneIDi436805.
KEGGidre:436805.

Organism-specific databases

ZFINiZDB-GENE-040718-265. zgc:92912.

Phylogenomic databases

GeneTreeiENSGT00550000074449.
HOVERGENiHBG006675.
KOiK08510.
OMAiWKNCKVE.
OrthoDBiEOG091G0MPE.

Gene expression databases

BgeeiENSDARG00000097576.

Family and domain databases

InterProiView protein in InterPro
IPR001388. Synaptobrevin.
PfamiView protein in Pfam
PF00957. Synaptobrevin. 1 hit.
PRINTSiPR00219. SYNAPTOBREVN.
PROSITEiView protein in PROSITE
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiQ6DGI1_DANRE
AccessioniPrimary (citable) accession number: Q6DGI1
Entry historyiIntegrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: April 12, 2017
This is version 94 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.