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Q6DGF9

- ACBD4_RAT

UniProt

Q6DGF9 - ACBD4_RAT

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Protein

Acyl-CoA-binding domain-containing protein 4

Gene

Acbd4

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Binds medium- and long-chain acyl-CoA esters and may function as an intracellular carrier of acyl-CoA esters.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei67 – 671Acyl-CoABy similarity
Binding sitei86 – 861Acyl-CoABy similarity

GO - Molecular functioni

  1. fatty-acyl-CoA binding Source: InterPro
  2. lipid binding Source: UniProtKB-KW
Complete GO annotation...

Keywords - Ligandi

Lipid-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Acyl-CoA-binding domain-containing protein 4
Gene namesi
Name:Acbd4
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 10

Organism-specific databases

RGDi1308404. Acbd4.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 326326Acyl-CoA-binding domain-containing protein 4PRO_0000214034Add
BLAST

Proteomic databases

PRIDEiQ6DGF9.

PTM databases

PhosphoSiteiQ6DGF9.

Expressioni

Gene expression databases

GenevestigatoriQ6DGF9.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000004163.

Structurei

3D structure databases

ProteinModelPortaliQ6DGF9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini10 – 9990ACBPROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni21 – 3010Acyl-CoA bindingBy similarity
Regioni41 – 455Acyl-CoA bindingBy similarity

Sequence similaritiesi

Contains 1 ACB (acyl-CoA-binding) domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG4281.
GeneTreeiENSGT00730000110900.
HOGENOMiHOG000231479.
HOVERGENiHBG028530.
InParanoidiQ6DGF9.
OMAiWLVGTVR.
OrthoDBiEOG7TJ3JP.
PhylomeDBiQ6DGF9.
TreeFamiTF319446.

Family and domain databases

Gene3Di1.20.80.10. 1 hit.
InterProiIPR022408. Acyl-CoA-binding_prot_CS.
IPR000582. Acyl-CoA-binding_protein.
IPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
[Graphical view]
PfamiPF00887. ACBP. 1 hit.
[Graphical view]
PRINTSiPR00689. ACOABINDINGP.
SUPFAMiSSF47027. SSF47027. 1 hit.
PROSITEiPS00880. ACB_1. 1 hit.
PS51228. ACB_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6DGF9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MGTEKEEPDC QKQFQAAVSV IQNLPKNGSY RPSYEEMLRF YSYYKQATAG
60 70 80 90 100
PCLVPRPGFW DPIGRYKWDA WNSLGKMSRE EAMSAYITEM KLVAQKVIDT
110 120 130 140 150
VPLGEVAEDM FGYFEPLYQV IPDMPRPPET FLRRVTGWQE PAVNRDVQAA
160 170 180 190 200
PEPSHPPKEP APPSPESRLP RDLDLEVFCD SVEQLEPELV RVPVLSPVPA
210 220 230 240 250
ESELPHLHTG TGDSAQRVWA EQKEAAGREL TTRSSPESPE GFGGSLMGPQ
260 270 280 290 300
ELDRWLVGTV QAMQESMKDV HRRLQILESK PQPLEQQRSP RTRPWPLGLS
310 320
TPTLLFFILW PFVVQWLFRQ FRTQRR
Length:326
Mass (Da):37,316
Last modified:August 16, 2004 - v1
Checksum:i9936AC0B4FC13C61
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC076387 mRNA. Translation: AAH76387.1.
RefSeqiNP_001012013.1. NM_001012013.1.
XP_006247572.1. XM_006247510.2.
UniGeneiRn.18284.

Genome annotation databases

EnsembliENSRNOT00000004163; ENSRNOP00000004163; ENSRNOG00000003108.
GeneIDi303577.
KEGGirno:303577.
UCSCiRGD:1308404. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BC076387 mRNA. Translation: AAH76387.1 .
RefSeqi NP_001012013.1. NM_001012013.1.
XP_006247572.1. XM_006247510.2.
UniGenei Rn.18284.

3D structure databases

ProteinModelPortali Q6DGF9.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000004163.

PTM databases

PhosphoSitei Q6DGF9.

Proteomic databases

PRIDEi Q6DGF9.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000004163 ; ENSRNOP00000004163 ; ENSRNOG00000003108 .
GeneIDi 303577.
KEGGi rno:303577.
UCSCi RGD:1308404. rat.

Organism-specific databases

CTDi 79777.
RGDi 1308404. Acbd4.

Phylogenomic databases

eggNOGi COG4281.
GeneTreei ENSGT00730000110900.
HOGENOMi HOG000231479.
HOVERGENi HBG028530.
InParanoidi Q6DGF9.
OMAi WLVGTVR.
OrthoDBi EOG7TJ3JP.
PhylomeDBi Q6DGF9.
TreeFami TF319446.

Miscellaneous databases

NextBioi 651653.

Gene expression databases

Genevestigatori Q6DGF9.

Family and domain databases

Gene3Di 1.20.80.10. 1 hit.
InterProi IPR022408. Acyl-CoA-binding_prot_CS.
IPR000582. Acyl-CoA-binding_protein.
IPR014352. FERM/acyl-CoA-bd_prot_3-hlx.
[Graphical view ]
Pfami PF00887. ACBP. 1 hit.
[Graphical view ]
PRINTSi PR00689. ACOABINDINGP.
SUPFAMi SSF47027. SSF47027. 1 hit.
PROSITEi PS00880. ACB_1. 1 hit.
PS51228. ACB_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Kidney.

Entry informationi

Entry nameiACBD4_RAT
AccessioniPrimary (citable) accession number: Q6DGF9
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 7, 2005
Last sequence update: August 16, 2004
Last modified: October 29, 2014
This is version 77 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3