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Protein

SH3 domain-containing YSC84-like protein 1

Gene

sh3yl1

Organism
Xenopus laevis (African clawed frog)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
SH3 domain-containing YSC84-like protein 1
Gene namesi
Name:sh3yl1
OrganismiXenopus laevis (African clawed frog)
Taxonomic identifieri8355 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiAmphibiaBatrachiaAnuraPipoideaPipidaeXenopodinaeXenopusXenopus

Organism-specific databases

XenbaseiXB-GENE-953859. sh3yl1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 335335SH3 domain-containing YSC84-like protein 1PRO_0000341564Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ6DFH5.
SMRiQ6DFH5. Positions 282-335.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini276 – 33560SH3PROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the SH3YL1 family.Curated
Contains 1 SH3 domain.PROSITE-ProRule annotation

Keywords - Domaini

SH3 domain

Phylogenomic databases

HOVERGENiHBG108487.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR007461. Ysc84_actin-binding.
[Graphical view]
PfamiPF04366. DUF500. 1 hit.
PF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6DFH5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNPIPSNLK SESRKAAKIL KEFTTISSRN GPDKIIPPHV IAKAQGLAVL
60 70 80 90 100
SVIKAGFLVT ARGGSGIVLA RLPGGRWSAP SAIGIAGLGG GFEIGIEVSD
110 120 130 140 150
LVIILNHERA VRAFAKGGNL TLGGNFTVAV GPLGRNLEGD VAIRSSAAVY
160 170 180 190 200
TYCKSRGLFA GISLEGSGLI ERKETNRKFY GQDDIRAYEI LFGEIFRPTE
210 220 230 240 250
AKELYEILDS FTEKYEIEEQ SVNMRKMARE QRKEAKSSRP RSFPSSSGND
260 270 280 290 300
GQLTRPVHKV YPDLPSHSVP DRSSRGDCVV ATALYPFEGQ HSGDLPFQAG
310 320 330
DKITVLTKTN SQYDWWEGKL KGNIGIFPAN YVSVN
Length:335
Mass (Da):36,357
Last modified:August 15, 2004 - v1
Checksum:iB27C3F77D144EBC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC076762 mRNA. Translation: AAH76762.1.
RefSeqiNP_001086532.1. NM_001093063.1.
UniGeneiXl.48323.

Genome annotation databases

GeneIDi446367.
KEGGixla:446367.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC076762 mRNA. Translation: AAH76762.1.
RefSeqiNP_001086532.1. NM_001093063.1.
UniGeneiXl.48323.

3D structure databases

ProteinModelPortaliQ6DFH5.
SMRiQ6DFH5. Positions 282-335.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi446367.
KEGGixla:446367.

Organism-specific databases

CTDi26751.
XenbaseiXB-GENE-953859. sh3yl1.

Phylogenomic databases

HOVERGENiHBG108487.

Family and domain databases

InterProiIPR001452. SH3_domain.
IPR007461. Ysc84_actin-binding.
[Graphical view]
PfamiPF04366. DUF500. 1 hit.
PF00018. SH3_1. 1 hit.
[Graphical view]
PRINTSiPR00452. SH3DOMAIN.
SMARTiSM00326. SH3. 1 hit.
[Graphical view]
SUPFAMiSSF50044. SSF50044. 1 hit.
PROSITEiPS50002. SH3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. NIH - Xenopus Gene Collection (XGC) project
    Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Ovary.

Entry informationi

Entry nameiSH3Y1_XENLA
AccessioniPrimary (citable) accession number: Q6DFH5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: June 9, 2008
Last sequence update: August 15, 2004
Last modified: September 30, 2014
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.