Q6D915 (Q6D915_ERWCT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Rhamnogalacturonate lyase EMBL CAG73718.1

Gene names

Name:	rhiE EMBL CAG73718.1
Ordered Locus Names:	ECA0804

Organism

Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) [Complete proteome] [HAMAP]

Taxonomic identifier

29471 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length	576 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAG73718.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro lyase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6D915 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 8F5C9E00BFF2A262	FASTA	576	64,086
	10 20 30 40 50 60 MKRSVLLLVG AMLAPYSYSA QDNAVSLSVS GLNTVLDNGL LKVTFGEDGS AVSMVTGSKN 70 80 90 100 110 120 IVTNLSGAAR DPSKTRSAYL DYYINNGNVK GVKDFVPERL EVLRNDREMA HVAYIDDRGG 130 140 150 160 170 180 LLKLEYHLIM RRGVSGLYSY VVAENSGSQG VNVSELRNVY RFDPARLDHL YSGVRQGKPL 190 200 210 220 230 240 LYRQLEASPK VQDETWRLPD GSIYSKYDFA GYMRTAPFWG VFGNGVGAWL IHGNREYFSG 250 260 270 280 290 300 DALKQDLLVH QDAIILNYMT GSHFGTPDMK APPGWKKFYG PWLLYINEGD TEQVLADAQR 310 320 330 340 350 360 QALTETVSWP YKWVDDSRYA RDRTQVSGRV ASQQPVTVVL SSSLDEPFDV QTRGYSYQAT 370 380 390 400 410 420 TDSQGNFAIP HVRPGNYHLS VYANSGTQPG ILAEQALSVS GDKQVLPMIT LPKAESVVWA 430 440 450 460 470 480 IGQANRQASE FRFGNEVRNT RWQHEVPANL TFDIGRSDYQ RDWYYAQTKP GKWDIRFALQ 490 500 510 520 530 540 PEQKTYFLNI ALAAASNGGM SEPTVPQLTV MVNGTTLETL TYDNDKAIYR GALQSGRYHV 550 560 570 ARIPVSSGFL KNGNNTITLQ LKGGSVMYDV VTLSKE

References

[1]

"Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors." Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., Fraser A., Hance Z. , Hauser H., Jagels K., Moule S., Norbertczak H., Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K. Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004) [PubMed: 15263089] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SCRI 1043 / ATCC BAA-672.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX950851 Genomic DNA. Translation: CAG73718.1.
RefSeq	YP_048916.1. NC_004547.2.
3D structure databases
ProteinModelPortal	Q6D915.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2884605.
GenomeReviews	Gene locus ECA0804 in contig BX950851_GR.
KEGG	eca:ECA0804.
NMPDR	fig|218491.3.peg.3514.
PATRIC	20476798. VBIPecAtr54885_0803.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	PISLAMF.
ProtClustDB	CLSK2522675.
Family and domain databases
InterPro	IPR013784. Carb-bd-like_fold. IPR008979. Galactose-bd-like. IPR011013. Glyco_hydro-type_carb-bd. IPR013783. Ig-like_fold. IPR010325. Rhamnogal_lyase. [Graphical view]
Gene3D	G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
Pfam	PF06045. Rhamnogal_lyase. 1 hit. [Graphical view]
SUPFAM	SSF49452. CBD_4. 1 hit. SSF49785. Gal_bind_like. 1 hit. SSF74650. Gal_mut_like. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6D915_ERWCT

Accession

Primary (citable) accession number: Q6D915

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	December 14, 2011
This is version 35 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)