Q6D4I8 (Q6D4I8_ERWCT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Pectate disaccharide-lyase EMBL CAG75305.1
EC=4.2.2.9 EMBL CAG75305.1

Gene names

Name:	pelW EMBL CAG75305.1
Ordered Locus Names:	ECA2402

Organism

Erwinia carotovora subsp. atroseptica (Pectobacterium atrosepticum) [Complete proteome] [HAMAP]

Taxonomic identifier

29471 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Pectobacterium

Protein attributes

Sequence length	543 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Lyase EMBL CAG75305.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	pectin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	pectate disaccharide-lyase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6D4I8 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 745107640076554B	FASTA	543	62,332
	10 20 30 40 50 60 MSIFENLYTS RKSQLDEWVA ALDSHISCVQ EKGRSQSQPT LLLADGFDVE NYAPAVWQFP 70 80 90 100 110 120 DGHSAPISNF ASQQNWLRTL CAMSVVTGND SYQQHAIAQS EYFLDHFVDD NSGLFYWGGH 130 140 150 160 170 180 RFINLDTLEG EGPESKAQVH ELKHHLPYYA LLHRVNAEKT LNFFQGFWNA HVEDWNSLDL 190 200 210 220 230 240 GRHGDYSKKR DPDVFLHNRH DVVDPAQWPV LPLTKGLTFV NAGTDLIYAA FKYAEYTGDS 250 260 270 280 290 300 HAAAWGKHLY RQYVLARNPE TGMPVYQFSS PQQRQPVPED DNQTQSWFGD RAQRQFGPEF 310 320 330 340 350 360 GEIAREANVL FRDMRPLLID NPLAMLDILR TQPDAEMLNW VISGLKNYYQ YAYDVTSNTL 370 380 390 400 410 420 RPMWNNGQDM TGYRFKRDGY YGKAGTELKP FALEGDYLLP LVRAYRLSGD EDLYALVNTM 430 440 450 460 470 480 LTRLNKEDIQ HIASPLLLLT VIELADHKQS ESWAHYAAQL AGVMFEQHFH RGLFVRSAQH 490 500 510 520 530 540 RYVRLDDTYP LALLTFVAAC RNKLNDIPPY LTQGGYVHGD FHVNGENRIV YDVELIYPEL LTA

References

[1]

"Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp. atroseptica and characterization of virulence factors." Bell K.S., Sebaihia M., Pritchard L., Holden M.T.G., Hyman L.J., Holeva M.C., Thomson N.R., Bentley S.D., Churcher L.J.C., Mungall K., Atkin R., Bason N., Brooks K., Chillingworth T., Clark K., Doggett J., Fraser A., Hance Z. , Hauser H., Jagels K., Moule S., Norbertczak H., Ormond D., Price C., Quail M.A., Sanders M., Walker D., Whitehead S., Salmond G.P.C., Birch P.R.J., Parkhill J., Toth I.K. Proc. Natl. Acad. Sci. U.S.A. 101:11105-11110(2004) [PubMed: 15263089] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: SCRI 1043 / ATCC BAA-672.

Cross-references

Sequence databases
EMBL GenBank DDBJ	BX950851 Genomic DNA. Translation: CAG75305.1.
RefSeq	YP_050497.1. NC_004547.2.
3D structure databases
ProteinModelPortal	Q6D4I8.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2884509.
GenomeReviews	Gene locus ECA2402 in contig BX950851_GR.
KEGG	eca:ECA2402.
NMPDR	fig|218491.3.peg.834.
PATRIC	20480096. VBIPecAtr54885_2433.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG472751.
OMA	HRFINLD.
ProtClustDB	CLSK888942.
Family and domain databases
InterPro	IPR010702. Pectate_lyase_2. [Graphical view]
KO	K01731.
Pfam	PF06917. Pectate_lyase_2. 1 hit. [Graphical view]
PIRSF	PIRSF001432. Pect_lyase. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6D4I8_ERWCT

Accession

Primary (citable) accession number: Q6D4I8

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	December 14, 2011
This is version 34 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)