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Q6CZK0

- GLGB_PECAS

UniProt

Q6CZK0 - GLGB_PECAS

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene
glgB, ECA4151
Organism
Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Status
Reviewed - Annotation score: 3 out of 5 - Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position By similarity.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei403 – 4031Nucleophile By similarity
Active sitei456 – 4561Proton donor By similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciPATR218491:GJNB-4235-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgB (EC:2.4.1.18)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase
Alpha-(1->4)-glucan branching enzyme
Glycogen branching enzyme
Short name:
BE
Gene namesi
Name:glgB
Ordered Locus Names:ECA4151
OrganismiPectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) (Erwinia carotovora subsp. atroseptica)
Taxonomic identifieri218491 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaePectobacterium
ProteomesiUP000007966: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7257251,4-alpha-glucan branching enzyme GlgBUniRule annotationPRO_0000188706Add
BLAST

Interactioni

Subunit structurei

Monomer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi218491.ECA4151.

Structurei

3D structure databases

ProteinModelPortaliQ6CZK0.
SMRiQ6CZK0. Positions 115-725.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiAKLLFMG.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6CZK0-1 [UniParc]FASTAAdd to Basket

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MSAFSEAINS LFSGHYADPF SLLGMHHSSK GLEVRALLPD ADAAWVVDAS    50
NGRKIVELER VDGRGFFCGL VPNRKHDFHY QLAVTWREET WVIEDPYRFG 100
PLLQDMDIWL LAEGTHLRPY ERLGAHLETL DGVEGTRFAV WAPNAQRVSV 150
VGQFNFWDGR RHPMRLRKEN GIWELFLPDV KAGQLYKYEM IDSHGSVRLK 200
ADPYAFEAQM RPDTASLITP LPEKVPTNEA RREANSLRSP ISIYEVHLGS 250
WRRHTDNNFW LSYQELANQL IDYVQYMGFT HVELMPINEH PFDGSWGYQP 300
LGLYAPTRRF GTASDFRAFV DALHGAGINV LLDWVPGHFP GDEYGLAQFD 350
GTALYEYSDP REGYHQDWNT LIYNYGRHEV RNYLAGNALF WMERYGIDGL 400
RVDAVASMIY RDYSRSEGEW VPNHYGGKEN LEAIAFLRYT NHTLGHAAPA 450
AITLAEESTD YPGVTLPPDC NGLGFHYKWN MGWMHDTLTY MQLDPVHRKH 500
HHDLLTFGML YAYSENFVLP LSHDEVVHGK RSLLDRMPGD VWQKFANLRA 550
YYGFMWAYPG KKLLFMGCEF AQGREWNHDA SLDWHLLDEP EGWHRGVQAL 600
VRDLNHYYRQ QPSLYQLDFQ PQGFEWLVVD DRENSVFAFI RRDEQGNEVL 650
VVSNFTPVPR YGYRIGINQP GGWREVMNTD SVHYNGSDQG NVGTIYSEEW 700
GSHQRQHSLV LTIPPLATLY LVKEA 725
Length:725
Mass (Da):83,656
Last modified:August 16, 2004 - v1
Checksum:i4F94B0ADFB303336
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX950851 Genomic DNA. Translation: CAG77048.1.
RefSeqiYP_052238.1. NC_004547.2.

Genome annotation databases

EnsemblBacteriaiCAG77048; CAG77048; ECA4151.
GeneIDi2882436.
KEGGieca:ECA4151.
PATRICi20483757. VBIPecAtr54885_4224.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
BX950851 Genomic DNA. Translation: CAG77048.1 .
RefSeqi YP_052238.1. NC_004547.2.

3D structure databases

ProteinModelPortali Q6CZK0.
SMRi Q6CZK0. Positions 115-725.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 218491.ECA4151.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai CAG77048 ; CAG77048 ; ECA4151 .
GeneIDi 2882436.
KEGGi eca:ECA4151.
PATRICi 20483757. VBIPecAtr54885_4224.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi AKLLFMG.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci PATR218491:GJNB-4235-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: SCRI 1043 / ATCC BAA-672.

Entry informationi

Entry nameiGLGB_PECAS
AccessioniPrimary (citable) accession number: Q6CZK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: August 16, 2004
Last modified: June 11, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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