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Protein

Synaptobrevin homolog YKT6

Gene

YKT6

Organism
Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Synaptobrevin homolog YKT6 (EC:2.3.1.-)
Gene namesi
Name:YKT6
Ordered Locus Names:KLLA0D02684g
OrganismiKluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) (Yeast) (Candida sphaerica)
Taxonomic identifieri284590 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesSaccharomycetaceaeKluyveromyces
Proteomesi
  • UP000000598 Componenti: Chromosome D

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 197197Synaptobrevin homolog YKT6PRO_0000206777Add
BLAST
Propeptidei198 – 2003Removed in mature formBy similarityPRO_0000396672

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Lipidationi196 – 1961S-palmitoyl cysteineBy similarity
Modified residuei197 – 1971Cysteine methyl esterBy similarity
Lipidationi197 – 1971S-farnesyl cysteineBy similarity

Keywords - PTMi

Lipoprotein, Methylation, Palmitate, Prenylation

Interactioni

Protein-protein interaction databases

STRINGi284590.XP_453187.1.

Structurei

3D structure databases

ProteinModelPortaliQ6CSA2.
SMRiQ6CSA2. Positions 1-140.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini7 – 129123LonginPROSITE-ProRule annotationAdd
BLAST
Domaini140 – 20061v-SNARE coiled-coil homologyPROSITE-ProRule annotationAdd
BLAST

Sequence similaritiesi

Belongs to the synaptobrevin family.Curated
Contains 1 longin domain.PROSITE-ProRule annotation
Contains 1 v-SNARE coiled-coil homology domain.PROSITE-ProRule annotation

Keywords - Domaini

Coiled coil

Phylogenomic databases

eggNOGiKOG0861. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000189970.
InParanoidiQ6CSA2.
KOiK08516.
OMAiKTQITEN.
OrthoDBiEOG7W9S5V.

Family and domain databases

Gene3Di3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6CSA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKIYYIGVLR NSDDKTLELS SVKDLSQFGF FERNSVAQFM SFFSETVAGR
60 70 80 90 100
TSAGQRQSVE EGNYVGHVYA RPEGICGVLI TDKEYPVRPA YTLLNKVLDE
110 120 130 140 150
YLVAHPPIQW KDVTESDDSL KLKELDIYIA KYQDPSQADA IMRVQQELDE
160 170 180 190 200
TKITLHKTIE NVLQRGEKLD NLVDKSESLS AASRMFYKQA KKTNSCCIVM
Length:200
Mass (Da):22,764
Last modified:August 16, 2004 - v1
Checksum:i15CA4A4D258E3A13
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382124 Genomic DNA. Translation: CAH00283.1.
RefSeqiXP_453187.1. XM_453187.1.

Genome annotation databases

EnsemblFungiiCAH00283; CAH00283; KLLA0_D02684g.
GeneIDi2893012.
KEGGikla:KLLA0D02684g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382124 Genomic DNA. Translation: CAH00283.1.
RefSeqiXP_453187.1. XM_453187.1.

3D structure databases

ProteinModelPortaliQ6CSA2.
SMRiQ6CSA2. Positions 1-140.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi284590.XP_453187.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAH00283; CAH00283; KLLA0_D02684g.
GeneIDi2893012.
KEGGikla:KLLA0D02684g.

Phylogenomic databases

eggNOGiKOG0861. Eukaryota.
COG5143. LUCA.
HOGENOMiHOG000189970.
InParanoidiQ6CSA2.
KOiK08516.
OMAiKTQITEN.
OrthoDBiEOG7W9S5V.

Family and domain databases

Gene3Di3.30.450.50. 1 hit.
InterProiIPR011012. Longin-like_dom.
IPR010908. Longin_dom.
IPR001388. Synaptobrevin.
[Graphical view]
PfamiPF13774. Longin. 1 hit.
PF00957. Synaptobrevin. 1 hit.
[Graphical view]
PRINTSiPR00219. SYNAPTOBREVN.
SMARTiSM01270. Longin. 1 hit.
[Graphical view]
SUPFAMiSSF64356. SSF64356. 1 hit.
PROSITEiPS50859. LONGIN. 1 hit.
PS00417. SYNAPTOBREVIN. 1 hit.
PS50892. V_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYKT6_KLULA
AccessioniPrimary (citable) accession number: Q6CSA2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 26, 2005
Last sequence update: August 16, 2004
Last modified: May 11, 2016
This is version 78 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.