Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

Q6CCT1 (GLGB_YARLI) Reviewed, UniProtKB/Swiss-Prot

Last modified May 14, 2014. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (3) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
1,4-alpha-glucan-branching enzyme

EC=2.4.1.18
Alternative name(s):
Glycogen-branching enzyme
Gene names
Name:GLC3
Ordered Locus Names:YALI0C06798g
OrganismYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) [Reference proteome]
Taxonomic identifier284591 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia

Protein attributes

Sequence length691 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

Pathway

Glycan biosynthesis; glycogen biosynthesis.

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 6916911,4-alpha-glucan-branching enzyme
PRO_0000188785

Sites

Active site3331Nucleophile By similarity
Active site3981Proton donor By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6CCT1 [UniParc].

Last modified August 16, 2004. Version 1.
Checksum: 24D19060CFAB35C2

FASTA69179,306
        10         20         30         40         50         60 
MTLQVCKDDP WLKPFEEELL RRQALVGQWK DHFAKEGGLA EFAASYKRYG LHVNKDNSVT 

        70         80         90        100        110        120 
YREWAPGASE AVLTGDFNGW DRQQYHMTRD EYGLWSVTVP PTSDGQVAIP HNSKVKLALK 

       130        140        150        160        170        180 
TSNGQWVDRL PAWSTYVVQD LSKSPIYEAV FWNPPESEKY QWKNKSPPTP ANAQIYEAHV 

       190        200        210        220        230        240 
GISSSEPRVG TYKEFTKNIL PRIHKLGYNV IQLMAIMEHA YYASFGYQVT SFYAISSRYG 

       250        260        270        280        290        300 
TPEDLKELID TAHGMGITVL LDVVHSHACK NVDDGLNNFD GTDHQYFHGG AKGDHPQWDS 

       310        320        330        340        350        360 
KLFDYGKYEV LRFLLSNLRF YIEEYHFDGF RFDGVTSMLY KHHGLGTGFS GGYHEYFGDE 

       370        380        390        400        410        420 
HVDQQAVVYL MLAHELMREL QPLLRPGEDA GNFLSIAEDV SGMPALCRPV SEGGVGFDYR 

       430        440        450        460        470        480 
LAMAIPDMWI KLVKETRDED WDMGNIVFTL TNRRHREKTI AYAESHDQAL VGDKTLAFWL 

       490        500        510        520        530        540 
MDKEMYTSMS VLSDPNPIID RGIALHKMIR LITHSLGGEG YLNFEGNEFG HPEWLDFPRE 

       550        560        570        580        590        600 
GNGSSFHYCR RQWPVVDDKL LRYQHLNEFD AAMQHRGDHY GWLSADQAYV SLKNEDDKVV 

       610        620        630        640        650        660 
VYERAGLVFV FNFHPNKSFT DYRIGVDQPG TYTLVLDSDS PEFGGFGRID HEKTRCHTEP 

       670        680        690 
LEWNGRANCM HIYIPSRVAL VFAREDDPRR K 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR382129 Genomic DNA. Translation: CAG81834.1.
RefSeqXP_501531.1. XM_501531.1.

3D structure databases

ProteinModelPortalQ6CCT1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4952.Q6CCT1.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblFungiCAG81834; CAG81834; YALI0_C06798g.
GeneID2909223.
KEGGyli:YALI0C06798g.

Phylogenomic databases

eggNOGCOG0296.
HOGENOMHOG000175159.
KOK00700.
OMAANDAMHT.
OrthoDBEOG7647B5.

Enzyme and pathway databases

UniPathwayUPA00164.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFPIRSF000463. GlgB. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNetSearch...

Entry information

Entry nameGLGB_YARLI
AccessionPrimary (citable) accession number: Q6CCT1
Entry history
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: August 16, 2004
Last modified: May 14, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways

Glycosyl hydrolases

Classification of glycosyl hydrolase families and list of entries