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Q6CCT1

- GLGB_YARLI

UniProt

Q6CCT1 - GLGB_YARLI

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Protein

1,4-alpha-glucan-branching enzyme

Gene

GLC3

Organism
Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei333 – 3331NucleophileBy similarity
Active sitei398 – 3981Proton donorBy similarity

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Glycogen biosynthesis

Enzyme and pathway databases

UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
Alternative name(s):
Glycogen-branching enzyme
Gene namesi
Name:GLC3
Ordered Locus Names:YALI0C06798g
OrganismiYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Taxonomic identifieri284591 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia
ProteomesiUP000001300: Chromosome C

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 6916911,4-alpha-glucan-branching enzymePRO_0000188785Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi4952.Q6CCT1.

Structurei

3D structure databases

ProteinModelPortaliQ6CCT1.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000175159.
InParanoidiQ6CCT1.
KOiK00700.
OMAiANDAMHT.
OrthoDBiEOG7647B5.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6CCT1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTLQVCKDDP WLKPFEEELL RRQALVGQWK DHFAKEGGLA EFAASYKRYG
60 70 80 90 100
LHVNKDNSVT YREWAPGASE AVLTGDFNGW DRQQYHMTRD EYGLWSVTVP
110 120 130 140 150
PTSDGQVAIP HNSKVKLALK TSNGQWVDRL PAWSTYVVQD LSKSPIYEAV
160 170 180 190 200
FWNPPESEKY QWKNKSPPTP ANAQIYEAHV GISSSEPRVG TYKEFTKNIL
210 220 230 240 250
PRIHKLGYNV IQLMAIMEHA YYASFGYQVT SFYAISSRYG TPEDLKELID
260 270 280 290 300
TAHGMGITVL LDVVHSHACK NVDDGLNNFD GTDHQYFHGG AKGDHPQWDS
310 320 330 340 350
KLFDYGKYEV LRFLLSNLRF YIEEYHFDGF RFDGVTSMLY KHHGLGTGFS
360 370 380 390 400
GGYHEYFGDE HVDQQAVVYL MLAHELMREL QPLLRPGEDA GNFLSIAEDV
410 420 430 440 450
SGMPALCRPV SEGGVGFDYR LAMAIPDMWI KLVKETRDED WDMGNIVFTL
460 470 480 490 500
TNRRHREKTI AYAESHDQAL VGDKTLAFWL MDKEMYTSMS VLSDPNPIID
510 520 530 540 550
RGIALHKMIR LITHSLGGEG YLNFEGNEFG HPEWLDFPRE GNGSSFHYCR
560 570 580 590 600
RQWPVVDDKL LRYQHLNEFD AAMQHRGDHY GWLSADQAYV SLKNEDDKVV
610 620 630 640 650
VYERAGLVFV FNFHPNKSFT DYRIGVDQPG TYTLVLDSDS PEFGGFGRID
660 670 680 690
HEKTRCHTEP LEWNGRANCM HIYIPSRVAL VFAREDDPRR K
Length:691
Mass (Da):79,306
Last modified:August 16, 2004 - v1
Checksum:i24D19060CFAB35C2
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR382129 Genomic DNA. Translation: CAG81834.1.
RefSeqiXP_501531.1. XM_501531.1.

Genome annotation databases

EnsemblFungiiCAG81834; CAG81834; YALI0_C06798g.
GeneIDi2909223.
KEGGiyli:YALI0C06798g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CR382129 Genomic DNA. Translation: CAG81834.1 .
RefSeqi XP_501531.1. XM_501531.1.

3D structure databases

ProteinModelPortali Q6CCT1.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 4952.Q6CCT1.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblFungii CAG81834 ; CAG81834 ; YALI0_C06798g .
GeneIDi 2909223.
KEGGi yli:YALI0C06798g.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000175159.
InParanoidi Q6CCT1.
KOi K00700.
OMAi ANDAMHT.
OrthoDBi EOG7647B5.

Enzyme and pathway databases

UniPathwayi UPA00164 .

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 1 hit.
ProtoNeti Search...

Entry informationi

Entry nameiGLGB_YARLI
AccessioniPrimary (citable) accession number: Q6CCT1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: August 16, 2004
Last modified: October 29, 2014
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3