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Q6CCT1

- GLGB_YARLI

UniProt

Q6CCT1 - GLGB_YARLI

Protein

1,4-alpha-glucan-branching enzyme

Gene

GLC3

Organism
Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Status
Reviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 73 (01 Oct 2014)
      Sequence version 1 (16 Aug 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei333 – 3331NucleophileBy similarity
    Active sitei398 – 3981Proton donorBy similarity

    GO - Molecular functioni

    1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

    GO - Biological processi

    1. glycogen biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Keywords - Biological processi

    Glycogen biosynthesis

    Enzyme and pathway databases

    UniPathwayiUPA00164.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    1,4-alpha-glucan-branching enzyme (EC:2.4.1.18)
    Alternative name(s):
    Glycogen-branching enzyme
    Gene namesi
    Name:GLC3
    Ordered Locus Names:YALI0C06798g
    OrganismiYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
    Taxonomic identifieri284591 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia
    ProteomesiUP000001300: Chromosome C

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 6916911,4-alpha-glucan-branching enzymePRO_0000188785Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi4952.Q6CCT1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6CCT1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Phylogenomic databases

    eggNOGiCOG0296.
    HOGENOMiHOG000175159.
    KOiK00700.
    OMAiANDAMHT.
    OrthoDBiEOG7647B5.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000463. GlgB. 1 hit.
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6CCT1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MTLQVCKDDP WLKPFEEELL RRQALVGQWK DHFAKEGGLA EFAASYKRYG    50
    LHVNKDNSVT YREWAPGASE AVLTGDFNGW DRQQYHMTRD EYGLWSVTVP 100
    PTSDGQVAIP HNSKVKLALK TSNGQWVDRL PAWSTYVVQD LSKSPIYEAV 150
    FWNPPESEKY QWKNKSPPTP ANAQIYEAHV GISSSEPRVG TYKEFTKNIL 200
    PRIHKLGYNV IQLMAIMEHA YYASFGYQVT SFYAISSRYG TPEDLKELID 250
    TAHGMGITVL LDVVHSHACK NVDDGLNNFD GTDHQYFHGG AKGDHPQWDS 300
    KLFDYGKYEV LRFLLSNLRF YIEEYHFDGF RFDGVTSMLY KHHGLGTGFS 350
    GGYHEYFGDE HVDQQAVVYL MLAHELMREL QPLLRPGEDA GNFLSIAEDV 400
    SGMPALCRPV SEGGVGFDYR LAMAIPDMWI KLVKETRDED WDMGNIVFTL 450
    TNRRHREKTI AYAESHDQAL VGDKTLAFWL MDKEMYTSMS VLSDPNPIID 500
    RGIALHKMIR LITHSLGGEG YLNFEGNEFG HPEWLDFPRE GNGSSFHYCR 550
    RQWPVVDDKL LRYQHLNEFD AAMQHRGDHY GWLSADQAYV SLKNEDDKVV 600
    VYERAGLVFV FNFHPNKSFT DYRIGVDQPG TYTLVLDSDS PEFGGFGRID 650
    HEKTRCHTEP LEWNGRANCM HIYIPSRVAL VFAREDDPRR K 691
    Length:691
    Mass (Da):79,306
    Last modified:August 16, 2004 - v1
    Checksum:i24D19060CFAB35C2
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR382129 Genomic DNA. Translation: CAG81834.1.
    RefSeqiXP_501531.1. XM_501531.1.

    Genome annotation databases

    EnsemblFungiiCAG81834; CAG81834; YALI0_C06798g.
    GeneIDi2909223.
    KEGGiyli:YALI0C06798g.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR382129 Genomic DNA. Translation: CAG81834.1 .
    RefSeqi XP_501531.1. XM_501531.1.

    3D structure databases

    ProteinModelPortali Q6CCT1.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4952.Q6CCT1.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii CAG81834 ; CAG81834 ; YALI0_C06798g .
    GeneIDi 2909223.
    KEGGi yli:YALI0C06798g.

    Phylogenomic databases

    eggNOGi COG0296.
    HOGENOMi HOG000175159.
    KOi K00700.
    OMAi ANDAMHT.
    OrthoDBi EOG7647B5.

    Enzyme and pathway databases

    UniPathwayi UPA00164 .

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006407. GlgB.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR004193. Glyco_hydro_13_N.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF02922. CBM_48. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000463. GlgB. 1 hit.
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF81296. SSF81296. 1 hit.
    ProtoNeti Search...

    Entry informationi

    Entry nameiGLGB_YARLI
    AccessioniPrimary (citable) accession number: Q6CCT1
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 10, 2005
    Last sequence update: August 16, 2004
    Last modified: October 1, 2014
    This is version 73 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programFungal Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Glycosyl hydrolases
      Classification of glycosyl hydrolase families and list of entries
    2. PATHWAY comments
      Index of metabolic and biosynthesis pathways
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3