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Protein

Protein arginine N-methyltransferase 2

Gene

RMT2

Organism
Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Protein inferred from homologyi

Functioni

S-adenosyl-L-methionine-dependent protein-arginine N-methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei254 – 2541S-adenosyl-L-methioninePROSITE-ProRule annotation
Binding sitei285 – 2851S-adenosyl-L-methioninePROSITE-ProRule annotation
Binding sitei378 – 3781S-adenosyl-L-methioninePROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Methyltransferase, Transferase

Keywords - Ligandi

S-adenosyl-L-methionine

Names & Taxonomyi

Protein namesi
Recommended name:
Protein arginine N-methyltransferase 2By similarity (EC:2.1.1.-By similarity)
Alternative name(s):
Protein-arginine N5-methyltransferaseBy similarity
Type IV protein arginine N-methyltransferaseBy similarity
Short name:
Type IV PRMTBy similarity
Gene namesi
Name:RMT2By similarity
Ordered Locus Names:YALI0C14718g
OrganismiYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Taxonomic identifieri284591 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia
Proteomesi
  • UP000001300 Componenti: Chromosome C

Subcellular locationi

  • Cytoplasm By similarity
  • Nucleus By similarity

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 475475Protein arginine N-methyltransferase 2PRO_0000228979Add
BLAST

Interactioni

Subunit structurei

Monomer.By similarity

Structurei

3D structure databases

ProteinModelPortaliQ6CBX2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini247 – 475229RMT2PROSITE-ProRule annotationAdd
BLAST

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni310 – 3156S-adenosyl-L-methionine bindingPROSITE-ProRule annotation
Regioni331 – 3333S-adenosyl-L-methionine bindingPROSITE-ProRule annotation
Regioni358 – 3592S-adenosyl-L-methionine bindingPROSITE-ProRule annotation

Sequence similaritiesi

Belongs to the class I-like SAM-binding methyltransferase superfamily. RMT2 methyltransferase family.PROSITE-ProRule annotation
Contains 1 RMT2 (arginine N-methyltransferase 2-like) domain.PROSITE-ProRule annotation

Phylogenomic databases

HOGENOMiHOG000214351.
InParanoidiQ6CBX2.
KOiK18477.
OMAiFEYGAGW.
OrthoDBiEOG092C2OT7.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR017408. Arginine_N-MeTrfase_2.
IPR026480. RMT2_dom.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PIRSFiPIRSF038148. Arginine_N-mtfrase-2. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
PROSITEiPS51559. SAM_RMT2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6CBX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFTEEETKL GKSLFEACSF TERPIAKDSH LETVRQVMRK NIPATITTSD
60 70 80 90 100
LGLFTDEEEA TKKKEIIQGD ITIDGTTPLH VICSSFPSDA TAEELEVALE
110 120 130 140 150
MMRELFQWGA GWMLLDEQGQ TPGCVAWDRS KAEARDSVLA SVYNEIVSAG
160 170 180 190 200
TRSEVFLRRI NKSENVEFLS DDDDEEMDVD DDEEDESRDG EETGDIQQAI
210 220 230 240 250
ADAIKQAKEA GLEVVVDGET VEEVPELVGD KEDEKNNESA AQNEVDLAGS
260 270 280 290 300
QMDYLKDKLT YTDDNKTLIT TQNDGVMMDW EDEIMQKSAD LLVSRADKES
310 320 330 340 350
DGPVVLNVGF GLGIIDTYLQ SKKPSKHYIC EAHPDVLEKM EKDGWMDKPG
360 370 380 390 400
VTVLVGRWQD TLPGLLSQGV YFDGMYYDTF SENYSDLVDF FDHVVGLLAP
410 420 430 440 450
TGVFSFFNGL GADRQVCYDV YKNVVEVDLQ EYGLNVEYQV IKVNKDVTGA
460 470
DGHVWDGIKR RYWVVEDFYL PVCTF
Length:475
Mass (Da):53,328
Last modified:August 16, 2004 - v1
Checksum:i86B6620419DB3E1F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382129 Genomic DNA. Translation: CAG82151.1.
RefSeqiXP_501840.1. XM_501840.1.

Genome annotation databases

EnsemblFungiiCAG82151; CAG82151; YALI0_C14718g.
GeneIDi2909738.
KEGGiyli:YALI0C14718g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382129 Genomic DNA. Translation: CAG82151.1.
RefSeqiXP_501840.1. XM_501840.1.

3D structure databases

ProteinModelPortaliQ6CBX2.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAG82151; CAG82151; YALI0_C14718g.
GeneIDi2909738.
KEGGiyli:YALI0C14718g.

Phylogenomic databases

HOGENOMiHOG000214351.
InParanoidiQ6CBX2.
KOiK18477.
OMAiFEYGAGW.
OrthoDBiEOG092C2OT7.

Family and domain databases

Gene3Di3.40.50.150. 1 hit.
InterProiIPR017408. Arginine_N-MeTrfase_2.
IPR026480. RMT2_dom.
IPR029063. SAM-dependent_MTases.
[Graphical view]
PIRSFiPIRSF038148. Arginine_N-mtfrase-2. 1 hit.
SUPFAMiSSF53335. SSF53335. 1 hit.
PROSITEiPS51559. SAM_RMT2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiRMT2_YARLI
AccessioniPrimary (citable) accession number: Q6CBX2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: August 16, 2004
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.