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Protein
Submitted name:

Chromosome D complete sequence

Gene

YALI0_D14520g

Organism
Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription Source: EnsemblFungi
  2. sequence-specific DNA binding Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
  2. regulation of cell size Source: EnsemblFungi
  3. regulation of cellular response to oxidative stress by regulation of transcription from RNA polymerase II promoter Source: EnsemblFungi
  4. regulation of conjugation with cellular fusion by regulation of transcription from RNA polymerase II promoter Source: EnsemblFungi
  5. regulation of transcription from RNA polymerase II promoter in response to oxidative stress Source: EnsemblFungi
  6. response to singlet oxygen Source: EnsemblFungi
Complete GO annotation...

Keywords - Ligandi

DNA-bindingSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Chromosome D complete sequenceImported
Gene namesi
ORF Names:YALI0_D14520gImported
OrganismiYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)Imported
Taxonomic identifieri284591 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia
ProteomesiUP000001300 Componenti: Chromosome D

Subcellular locationi

GO - Cellular componenti

  1. cytosol Source: EnsemblFungi
  2. nucleus Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi4952.Q6C937.

Structurei

3D structure databases

ProteinModelPortaliQ6C937.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

InParanoidiQ6C937.
KOiK15859.
OMAiVEDDSVC.
OrthoDBiEOG7ZKSNN.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiPF00447. HSF_DNA-bind. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00056. HSFDOMAIN.
SMARTiSM00415. HSF. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6C937-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEDDKTTATP PTEFVWKLYM MLEEGNDNTV FWTPDGRSFV ISDTIEFSKT
60 70 80 90 100
TLPRHFRHKN FSSFVRQLNK YDFHKVKSTN DDGEPVYGEN GWEFKHPNFL
110 120 130 140 150
QFDTSGIDSI RRKLPEKRRA EGPSGYRELE DELHDLKRKH ESLQKHFTSL
160 170 180 190 200
SEDFSNAIGK LSGLQESLKK KEETMNHVFS MLAEFEYRFE RLGMSQDDTA
210 220 230 240 250
SFDHIKRRRT DPSAAAQAQA QAQAQAQAQA QAQAQAQATT NYDDHMWPST
260 270 280 290 300
THTWLPLHPP QVRRDSNGKA HPDGHADNTA ESTEIHQNGE VQKILIASDD
310 320 330 340 350
SDCVKICSTL LQKAGQVVEV IPDGVDAVEF LQTSASHVGL VLMETVLPRL
360 370 380 390 400
DGCSAVELIR SMNRQVPIIM INDGSVNPKL EFLLQSGYVN EVLARPFNKD
410
DFFKAVSPHV SLASY
Length:415
Mass (Da):47,000
Last modified:August 16, 2004 - v1
Checksum:i0D738A30EEEE01B1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382130 Genomic DNA. Translation: CAG81013.1.
RefSeqiXP_502825.1. XM_502825.1.

Genome annotation databases

EnsemblFungiiCAG81013; CAG81013; YALI0_D14520g.
GeneIDi2910245.
KEGGiyli:YALI0D14520g.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382130 Genomic DNA. Translation: CAG81013.1.
RefSeqiXP_502825.1. XM_502825.1.

3D structure databases

ProteinModelPortaliQ6C937.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi4952.Q6C937.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiCAG81013; CAG81013; YALI0_D14520g.
GeneIDi2910245.
KEGGiyli:YALI0D14520g.

Phylogenomic databases

InParanoidiQ6C937.
KOiK15859.
OMAiVEDDSVC.
OrthoDBiEOG7ZKSNN.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR000232. HSF_DNA-bd.
IPR027725. HSF_fam.
IPR001789. Sig_transdc_resp-reg_receiver.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PANTHERiPTHR10015. PTHR10015. 1 hit.
PfamiPF00447. HSF_DNA-bind. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
PRINTSiPR00056. HSFDOMAIN.
SMARTiSM00415. HSF. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Genome evolution in yeasts."
    Genolevures
    Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.
    , Beckerich J.M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.F., Straub M.L., Suleau A., Swennene D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic I., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.L.
    Nature 430:35-44(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CLIB 122 / E 150Imported.

Entry informationi

Entry nameiQ6C937_YARLI
AccessioniPrimary (citable) accession number: Q6C937
Entry historyi
Integrated into UniProtKB/TrEMBL: August 16, 2004
Last sequence update: August 16, 2004
Last modified: April 29, 2015
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.