Q6C700 (Q6C700_YARLI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
YALI0E04939p EMBL CAG79143.1

Gene names

Ordered Locus Names:

YALI0E04939g

Organism

Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)

Taxonomic identifier

284591 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › Yarrowia

Protein attributes

Sequence length	473 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	asparaginyl-tRNA aminoacylation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW asparagine-tRNA ligase activity Inferred from electronic annotation. Source: InterPro nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6C700 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 8A6F96E727CA984E	FASTA	473	53,172
	10 20 30 40 50 60 MTQRVFESST VRSITTLPQT INQIKTENKH ILGTQDASPV TINGWIKSVQ KLKNVAFLNI 70 80 90 100 110 120 SDGNCAQGVM AVLQPDQVTS DLTTGACVSV KGNLVSSQGK KQGLELQAES VKVTGTVDEY 130 140 150 160 170 180 PIQKKFHKQE FLRTLPALRW RTSVNSSTLR YRSFCMAQMT NFFAENDFVQ TNPPLLTSSD 190 200 210 220 230 240 CEGAGEVFKV AGGGKGDKFF GDKPAYLTVS TQLHLEVLAA AVGRVWTFTP AFRAENSDTN 250 260 270 280 290 300 RHLSEFWMAE AEISFIDDLE PLMDLAEGMV KSCLAPLMEE GNKARNDLLD ARRSAEQKEE 310 320 330 340 350 360 LLDRWDMANC DFPRLTYKQA IKILNLQHLK EPFAHRPDYE VGLRSEHEKW LATEYFISPV 370 380 390 400 410 420 FVTDYPKEQK PFYMKQSPHD SQTVACFDLL MPHIGEVIGG SVREDNYDTL LKNIETTGMD 430 440 450 460 470 KSALEWYLEL RKQGSTPHGG FGMGFERLIS YATGIENIRD VTAFPRWVDN CSC

References

[1]

"Genome evolution in yeasts." Genolevures Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S. , Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L. Nature 430:35-44(2004) [PubMed: 15229592] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIB 122 / E 150.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR382131 Genomic DNA. Translation: CAG79143.1.
RefSeq	XP_503562.1. XM_503562.1.
3D structure databases
ProteinModelPortal	Q6C700.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6C700.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2912267.
GenomeReviews	Gene locus YALI0E04939g in contig CR382131_GR.
KEGG	yli:YALI0E04939g.
Phylogenomic databases
eggNOG	fuNOG05389.
HOGENOM	HBG745843.
OMA	HYELHAD.
OrthoDB	EOG45F0Z6.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004522. Asn-tRNA-synth_IIb. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01893.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF6. PTHR22594:SF6. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00457. AsnS. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6C700_YARLI

Accession

Primary (citable) accession number: Q6C700

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	December 14, 2011
This is version 64 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)