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Q6C2F2

- Q6C2F2_YARLI

UniProt

Q6C2F2 - Q6C2F2_YARLI

Protein

Glutamate decarboxylase

Gene

YALI0_F08415g

Organism
Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 63 (01 Oct 2014)
      Sequence version 1 (16 Aug 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. glutamate decarboxylase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. glutamate metabolic process Source: InterPro

    Keywords - Molecular functioni

    DecarboxylaseUniRule annotation, Lyase

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
    Gene namesi
    ORF Names:YALI0_F08415gImported
    OrganismiYarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)Imported
    Taxonomic identifieri284591 [NCBI]
    Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDipodascaceaeYarrowia
    ProteomesiUP000001300: Chromosome F

    Interactioni

    Protein-protein interaction databases

    STRINGi4952.Q6C2F2.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6C2F2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    HOGENOMiHOG000070228.
    KOiK01580.
    OMAiKPNIIMG.
    OrthoDBiEOG7P2Z22.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    InterProiIPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view]
    PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6C2F2-1 [UniParc]FASTAAdd to Basket

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    MVLSEHVNAD KLLSNLTGKG DEHAIRALIA SHTLRDPYSS KYNSQEPIPK    50
    FRIPEEGCEE KQAYQLIKDD LDLDGKPNLN LASFVNTYIS DRAEKLAVEN 100
    LTKNLADADE YPALMTVHAR CVSILGHLWN NTDHEKAIGT ATTGSSEAIH 150
    LGGLAMKKRW QEKRRAAGKS TEKPNILMAA NAQVALEKFA RYFDVEDRII 200
    PVREASKHCL DLSKIKENLD ENTIGIFVIM GSTYTGHYED VQGVAKILDE 250
    YEKETGHSID IHVDGASGAM VAPFLYPDLE WDFRVPRVKS INTSGHKFGL 300
    TTAGLGWILW RDAKYLPKEL IFELHYLGGK EESYTLNFSR PGFPVLHQYY 350
    NFLHLGFDGY KQLHASSMAN ARLLSVFLEA TGHYTCVSEI HLPANGSKPK 400
    DVKHVATADP LQYMAGLPVV AFRFSDSFRK AHPEVPQAAV STLLRVKGYI 450
    IPNYELPPSE QKTEILRVVV RQSMSIDLLD RLMEDISAIT NVLLEAVEDV 500
    KKLRAEGDHD PQLIHKYVLT LVTGKPVEER EEDWEGHSTF RAAC 544
    Length:544
    Mass (Da):61,021
    Last modified:August 16, 2004 - v1
    Checksum:i31973763B6D4AB9D
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR382132 Genomic DNA. Translation: CAG77967.1.
    RefSeqiXP_505160.1. XM_505160.1.

    Genome annotation databases

    EnsemblFungiiCAG77967; CAG77967; YALI0_F08415g.
    GeneIDi2908500.
    KEGGiyli:YALI0F08415g.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CR382132 Genomic DNA. Translation: CAG77967.1 .
    RefSeqi XP_505160.1. XM_505160.1.

    3D structure databases

    ProteinModelPortali Q6C2F2.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 4952.Q6C2F2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblFungii CAG77967 ; CAG77967 ; YALI0_F08415g .
    GeneIDi 2908500.
    KEGGi yli:YALI0F08415g.

    Phylogenomic databases

    HOGENOMi HOG000070228.
    KOi K01580.
    OMAi KPNIIMG.
    OrthoDBi EOG7P2Z22.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    InterProi IPR010107. Glutamate_decarboxylase.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    [Graphical view ]
    PANTHERi PTHR11999:SF1. PTHR11999:SF1. 1 hit.
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR01788. Glu-decarb-GAD. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Genome evolution in yeasts."
      Genolevures
      Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S.
      , Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L.
      Nature 430:35-44(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: CLIB 122 / E 150Imported.

    Entry informationi

    Entry nameiQ6C2F2_YARLI
    AccessioniPrimary (citable) accession number: Q6C2F2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: August 16, 2004
    Last sequence update: August 16, 2004
    Last modified: October 1, 2014
    This is version 63 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3