Q6C2F2 (Q6C2F2_YARLI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
YALI0F08415p EMBL CAG77967.1

Gene names

Ordered Locus Names:	YALI0F08415g
ORF Names:	YALI0_F08415g EMBL CAG77967.1

Organism

Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica) [Reference proteome] EMBL CAG77967.1

Taxonomic identifier

284591 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Fungi › Dikarya › Ascomycota › saccharomyceta › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › Yarrowia › Yarrowia lipolytica

Protein attributes

Sequence length	544 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6C2F2 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 31973763B6D4AB9D	FASTA	544	61,021
	10 20 30 40 50 60 MVLSEHVNAD KLLSNLTGKG DEHAIRALIA SHTLRDPYSS KYNSQEPIPK FRIPEEGCEE 70 80 90 100 110 120 KQAYQLIKDD LDLDGKPNLN LASFVNTYIS DRAEKLAVEN LTKNLADADE YPALMTVHAR 130 140 150 160 170 180 CVSILGHLWN NTDHEKAIGT ATTGSSEAIH LGGLAMKKRW QEKRRAAGKS TEKPNILMAA 190 200 210 220 230 240 NAQVALEKFA RYFDVEDRII PVREASKHCL DLSKIKENLD ENTIGIFVIM GSTYTGHYED 250 260 270 280 290 300 VQGVAKILDE YEKETGHSID IHVDGASGAM VAPFLYPDLE WDFRVPRVKS INTSGHKFGL 310 320 330 340 350 360 TTAGLGWILW RDAKYLPKEL IFELHYLGGK EESYTLNFSR PGFPVLHQYY NFLHLGFDGY 370 380 390 400 410 420 KQLHASSMAN ARLLSVFLEA TGHYTCVSEI HLPANGSKPK DVKHVATADP LQYMAGLPVV 430 440 450 460 470 480 AFRFSDSFRK AHPEVPQAAV STLLRVKGYI IPNYELPPSE QKTEILRVVV RQSMSIDLLD 490 500 510 520 530 540 RLMEDISAIT NVLLEAVEDV KKLRAEGDHD PQLIHKYVLT LVTGKPVEER EEDWEGHSTF RAAC

References

[1]

"Genome evolution in yeasts." Genolevures Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S. , Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L. Nature 430:35-44(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIB 122 / E 150.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR382132 Genomic DNA. Translation: CAG77967.1.
RefSeq	XP_505160.1. XM_505160.1.
3D structure databases
ProteinModelPortal	Q6C2F2.
ModBase	Search...
Protein-protein interaction databases
STRING	4952.Q6C2F2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2908500.
KEGG	yli:YALI0F08415g.
Phylogenomic databases
HOGENOM	HOG000070228.
KO	K01580.
OMA	MGANAQV.
OrthoDB	EOG43R6W5.
Family and domain databases
Gene3D	3.40.640.10. 1 hit.
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
PANTHER	PTHR11999:SF1. PTHR11999:SF1. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6C2F2_YARLI

Accession

Primary (citable) accession number: Q6C2F2

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)