Q6C0A5 (Q6C0A5_YARLI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
YALI0F26433p EMBL CAG78719.1

Gene names

Ordered Locus Names:

YALI0F26433g

Organism

Yarrowia lipolytica (strain CLIB 122 / E 150) (Yeast) (Candida lipolytica)

Taxonomic identifier

284591 [NCBI]

Taxonomic lineage

Eukaryota › Fungi › Dikarya › Ascomycota › Saccharomycotina › Saccharomycetes › Saccharomycetales › Dipodascaceae › Yarrowia

Protein attributes

Sequence length	649 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. RuleBase RU003746

Ontologies

Keywords
Biological process	Protein biosynthesis RuleBase RU003747
Ligand	ATP-binding RuleBase RU003747 Nucleotide-binding
Molecular function	Aminoacyl-tRNA synthetase RuleBase RU003747 Ligase
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological process	tRNA aminoacylation for protein translation Inferred from electronic annotation. Source: InterPro
Cellular component	cytoplasm Inferred from electronic annotation. Source: InterPro
Molecular function	ATP binding Inferred from electronic annotation. Source: UniProtKB-KW aminoacyl-tRNA ligase activity Inferred from electronic annotation. Source: UniProtKB-KW nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6C0A5 [UniParc]. Last modified August 16, 2004. Version 1. Checksum: 1D87FC206915782D	FASTA	649	72,690
	10 20 30 40 50 60 MLRAVRRIPR SVGGTLAATI RHKSTGLKFP ASETVVTKFS FPSRTHSITG LLKDAPALEQ 70 80 90 100 110 120 SQKKVTLQGW IHKKPRKVSK NLTFASLRDT NGDIIQLVDS NSPSMLRSMK PESAVVVEGV 130 140 150 160 170 180 VAKQRTAKKG VFDLVVSSSS VLNEANEKGS QLTLGDTKDW PAEYRYLQLR QPQLQAALKL 190 200 210 220 230 240 RANAMRASRS VLDNLGFTEV ETPLLFKSTP EGAREFLVPT RKRNLMYALP QSPQQYKQLL 250 260 270 280 290 300 MASGVHRYYQ LAKCFRDEDL RQDRQPEFTQ VDMEMAFANG ADVREVVEKL VLKIFADTVN 310 320 330 340 350 360 KNIYTLDANE NLVQQSTFNP MTFKEALGKY GIDKPDLRYT CAITDVSEHA TSFNEDFPVC 370 380 390 400 410 420 EILHVTKENA PESLDFLSEA RQYTNRIPDV IQITEENLSS WNQQVSQFKL DKTLPVSVGD 430 440 450 460 470 480 VVLASTRQTT SYENPTPLGR ARQLLIKEYP EKWRRQLASG EQLPSIEDTF VASWVIDFPL 490 500 510 520 530 540 FSPSSMDSDP EKSQPFPKFD YTQIVASHHP FTMAVLEDYP LLETDPLKVR GQHYDLVLNG 550 560 570 580 590 600 VEVGGGSTRV HDSQLQNYIF KEIMKIPNSE KLFGHLLRAF DVGCPPHAGF AIGFDRLVAM 610 620 630 640 LAGYSSIRDV IAFPKTVTGA DPMIGSPSAA TSAQLAPYHV RVAPKENKE

References

[1]

"Genome evolution in yeasts." Genolevures Dujon B., Sherman D., Fischer G., Durrens P., Casaregola S., Lafontaine I., de Montigny J., Marck C., Neuveglise C., Talla E., Goffard N., Frangeul L., Aigle M., Anthouard V., Babour A., Barbe V., Barnay S., Blanchin S. , Beckerich J.-M., Beyne E., Bleykasten C., Boisrame A., Boyer J., Cattolico L., Confanioleri F., de Daruvar A., Despons L., Fabre E., Fairhead C., Ferry-Dumazet H., Groppi A., Hantraye F., Hennequin C., Jauniaux N., Joyet P., Kachouri R., Kerrest A., Koszul R., Lemaire M., Lesur I., Ma L., Muller H., Nicaud J.-M., Nikolski M., Oztas S., Ozier-Kalogeropoulos O., Pellenz S., Potier S., Richard G.-F., Straub M.-L., Suleau A., Swennen D., Tekaia F., Wesolowski-Louvel M., Westhof E., Wirth B., Zeniou-Meyer M., Zivanovic Y., Bolotin-Fukuhara M., Thierry A., Bouchier C., Caudron B., Scarpelli C., Gaillardin C., Weissenbach J., Wincker P., Souciet J.-L. Nature 430:35-44(2004) [PubMed: 15229592] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CLIB 122 / E 150.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR382132 Genomic DNA. Translation: CAG78719.1.
RefSeq	XP_505907.1. XM_505907.1.
3D structure databases
ProteinModelPortal	Q6C0A5.
ModBase	Search...
Protein-protein interaction databases
STRING	Q6C0A5.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2908694.
GenomeReviews	Gene locus YALI0F26433g in contig CR382132_GR.
KEGG	yli:YALI0F26433g.
Phylogenomic databases
eggNOG	fuNOG04336.
HOGENOM	HBG396032.
OMA	AFPKTQQ.
OrthoDB	EOG4J40R5.
Family and domain databases
InterPro	IPR004364. aa-tRNA-synt_II. IPR018150. aa-tRNA-synt_II-like. IPR006195. aa-tRNA-synth_II. IPR004524. Asp-tRNA-synth_IIb_bac/mt. IPR002312. Asp/Asn-tRNA-synth_IIb. IPR004115. GAD_dom. IPR012340. NA-bd_OB-fold. IPR016027. NA-bd_OB-fold-like. IPR004365. NA-bd_OB_tRNA-helicase. [Graphical view]
Gene3D	G3DSA:3.30.1360.30. GAD_dom. 1 hit. G3DSA:2.40.50.140. OB_NA_bd_sub. 1 hit.
KO	K01876.
PANTHER	PTHR22594. aa-tRNA-synt_II. 1 hit. PTHR22594:SF5. AspS_bac. 1 hit.
Pfam	PF00152. tRNA-synt_2. 1 hit. PF01336. tRNA_anti. 1 hit. [Graphical view]
PRINTS	PR01042. TRNASYNTHASP.
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
TIGRFAMs	TIGR00459. AspS_bact. 1 hit.
PROSITE	PS50862. AA_TRNA_LIGASE_II. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6C0A5_YARLI

Accession

Primary (citable) accession number: Q6C0A5

Entry history

Integrated into UniProtKB/TrEMBL:	August 16, 2004
Last sequence update:	August 16, 2004
Last modified:	December 14, 2011
This is version 66 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)