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Q6BYG4 (UBC6_DEBHA) Reviewed, UniProtKB/Swiss-Prot

Last modified February 19, 2014. Version 73. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Ubiquitin-conjugating enzyme E2 6

EC=6.3.2.19
Alternative name(s):
Ubiquitin carrier protein UBC6
Ubiquitin-protein ligase UBC6
Gene names
Name:UBC6
Ordered Locus Names:DEHA2A09746g
OrganismDebaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii) [Complete proteome]
Taxonomic identifier284592 [NCBI]
Taxonomic lineageEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeDebaryomyces

Protein attributes

Sequence length242 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the covalent attachment of ubiquitin to other proteins. Functions in degradation of misfolded or regulated proteins localized in the endoplasmic reticulum (ER) lumen or membrane via the ubiquitin-proteasome system. Cognate E2 conjugating enzyme for the DOA10 ubiquitin ligase complex, which is part of the ERAD-C pathway responsible for the rapid degradation of membrane proteins with misfolded cytoplasmic domains By similarity.

Catalytic activity

ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.

Pathway

Protein modification; protein ubiquitination.

Subcellular location

Endoplasmic reticulum membrane By similarity.

Sequence similarities

Belongs to the ubiquitin-conjugating enzyme family.

Ontologies

Keywords
   Biological processUbl conjugation pathway
   Cellular componentEndoplasmic reticulum
Membrane
   DomainTransmembrane
Transmembrane helix
   LigandATP-binding
Nucleotide-binding
   Molecular functionLigase
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentendoplasmic reticulum membrane

Inferred from electronic annotation. Source: UniProtKB-SubCell

integral component of membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular_functionATP binding

Inferred from electronic annotation. Source: UniProtKB-KW

ubiquitin-protein ligase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 242242Ubiquitin-conjugating enzyme E2 6
PRO_0000082549

Regions

Topological domain1 – 220220Cytoplasmic Potential
Transmembrane221 – 24020Helical; Potential

Sites

Active site871Glycyl thioester intermediate By similarity

Sequences

Sequence LengthMass (Da)Tools
Q6BYG4 [UniParc].

Last modified December 16, 2008. Version 2.
Checksum: 881A9D61E0F7F02E

FASTA24227,282
        10         20         30         40         50         60 
MASRQSQKRL TKEYKAITLN PPPYVSAKPN DENILEWHYV ITGPPHTPFE EGQYHGILRF 

        70         80         90        100        110        120 
PSEYPFKPPS ISMITPNGRF ACNTRLCLSM SDYHPDTWNP AWSVATILTG LLSFMTGDES 

       130        140        150        160        170        180 
TTGSITTSDN VKKRLARSSK EWNNAENQRF TKQFPDLVAQ NKVDVAARNA REQAAATTDS 

       190        200        210        220        230        240 
TDPEKPFDVR ENIDSLDPED RARLLVEQDD HSTPSFGVQR FTLVGVVVAA FIAAYFNFFS 


RT 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR382133 Genomic DNA. Translation: CAG84716.2.
RefSeqXP_456755.2. XM_456755.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING4959.Q6BYG4.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID2899547.
KEGGdha:DEHA2A09746g.

Phylogenomic databases

eggNOGCOG5078.
HOGENOMHOG000170329.
KOK04554.
OMAFMTGDES.
OrthoDBEOG70S7GF.

Enzyme and pathway databases

UniPathwayUPA00143.

Family and domain databases

Gene3D3.10.110.10. 1 hit.
InterProIPR000608. UBQ-conjugat_E2.
IPR016135. UBQ-conjugating_enzyme/RWD.
[Graphical view]
PfamPF00179. UQ_con. 1 hit.
[Graphical view]
SUPFAMSSF54495. SSF54495. 1 hit.
PROSITEPS50127. UBIQUITIN_CONJUGAT_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameUBC6_DEBHA
AccessionPrimary (citable) accession number: Q6BYG4
Entry history
Integrated into UniProtKB/Swiss-Prot: January 24, 2006
Last sequence update: December 16, 2008
Last modified: February 19, 2014
This is version 73 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

PATHWAY comments

Index of metabolic and biosynthesis pathways