Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

U3 small nucleolar ribonucleoprotein protein IMP4

Gene

IMP4

Organism
Debaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Component of the U3 small nucleolar ribonucleoprotein. Required for the early cleavages at sites A0, A1 and A2 during 18S ribosomal pre-RNA processing (By similarity).By similarity

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein
Biological processRibosome biogenesis, rRNA processing

Names & Taxonomyi

Protein namesi
Recommended name:
U3 small nucleolar ribonucleoprotein protein IMP4
Short name:
U3 snoRNP protein IMP4
Gene namesi
Name:IMP4
Ordered Locus Names:DEHA2A10318g
OrganismiDebaryomyces hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968) (Yeast) (Torulaspora hansenii)
Taxonomic identifieri284592 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaSaccharomycotinaSaccharomycetesSaccharomycetalesDebaryomycetaceaeDebaryomyces
Proteomesi
  • UP000000599 Componenti: Chromosome A

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001202421 – 284U3 small nucleolar ribonucleoprotein protein IMP4Add BLAST284

Proteomic databases

PRIDEiQ6BYD9

Interactioni

Subunit structurei

Component of a heterotrimeric complex containing IMP3, IMP4 and MPP10.By similarity

Structurei

3D structure databases

SMRiQ6BYD9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini79 – 260BrixPROSITE-ProRule annotationAdd BLAST182

Phylogenomic databases

HOGENOMiHOG000172063
InParanoidiQ6BYD9
KOiK14561
OMAiFFNISDV
OrthoDBiEOG092C3ODK

Family and domain databases

InterProiView protein in InterPro
IPR007109 Brix
PfamiView protein in Pfam
PF04427 Brix, 1 hit
SMARTiView protein in SMART
SM00879 Brix, 1 hit
PROSITEiView protein in PROSITE
PS50833 BRIX, 1 hit

Sequencei

Sequence statusi: Complete.

Q6BYD9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIRKQARERR EYLYRKSLEL QESSLTEKRQ QLKAALASGK PLSKELAEDK
60 70 80 90 100
ELQKDFIYDE SEQTEIDDEY SALSGISEPK VLITTSRNPS VKLLQFSKEI
110 120 130 140 150
KLMFPNSIKL NRGNYVITDL VATCQRVQIS DLIILHEHRG IPTSLTISHF
160 170 180 190 200
PHGPSIIFTL HNVKLRHDLP EIGNSSESYP HLVFENFTSE LGKRVVKIMK
210 220 230 240 250
HLFPPGVKKD SSRVITFINN DDFISVRHHM YVKTKDTVEL SEVGPRFEMR
260 270 280
LYELRLGLLD NKDSEVEWQL RRFIRTGNRK NYLG
Length:284
Mass (Da):33,011
Last modified:December 16, 2008 - v2
Checksum:i2B0B3331AC1B88EE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR382133 Genomic DNA Translation: CAG84746.2
RefSeqiXP_456780.2, XM_456780.1

Genome annotation databases

EnsemblFungiiCAG84746; CAG84746; DEHA2A10318g
GeneIDi2899606
KEGGidha:DEHA2A10318g

Similar proteinsi

Entry informationi

Entry nameiIMP4_DEBHA
AccessioniPrimary (citable) accession number: Q6BYD9
Entry historyiIntegrated into UniProtKB/Swiss-Prot: August 16, 2005
Last sequence update: December 16, 2008
Last modified: May 23, 2018
This is version 71 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health