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Protein

Uncharacterized protein YjdP

Gene

yjdP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-1541.
ECOL316407:JW5890-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YjdP
Gene namesi
Name:yjdP
Ordered Locus Names:b4487, JW5890
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14407. yjdP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 10987Uncharacterized protein YjdPPRO_0000228848Add
BLAST

Proteomic databases

PaxDbiQ6BEX5.
PRIDEiQ6BEX5.

Structurei

3D structure databases

ProteinModelPortaliQ6BEX5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

HOGENOMiHOG000126975.
OMAiWQREVND.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q6BEX5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRFPLFLLF TLLTLSTVPA QADIIDDTIG NIQQAINDAY NPDRGRDYED
60 70 80 90 100
SRDDGWQREV SDDRRRQYDD RRRQFEDRRR QLDDRQRQLD QERRQLEDEE

RRMEDEYGR
Length:109
Mass (Da):13,469
Last modified:August 16, 2004 - v1
Checksum:i69888CBE4DCCD4CF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAT48239.1.
AP009048 Genomic DNA. Translation: BAE78094.1.
RefSeqiWP_000819746.1. NZ_LN832404.1.
YP_026281.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAT48239; AAT48239; b4487.
BAE78094; BAE78094; BAE78094.
GeneIDi2847754.
KEGGiecj:JW5890.
eco:b4487.
PATRICi32123741. VBIEscCol129921_4219.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAT48239.1.
AP009048 Genomic DNA. Translation: BAE78094.1.
RefSeqiWP_000819746.1. NZ_LN832404.1.
YP_026281.1. NC_000913.3.

3D structure databases

ProteinModelPortaliQ6BEX5.
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiQ6BEX5.
PRIDEiQ6BEX5.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT48239; AAT48239; b4487.
BAE78094; BAE78094; BAE78094.
GeneIDi2847754.
KEGGiecj:JW5890.
eco:b4487.
PATRICi32123741. VBIEscCol129921_4219.

Organism-specific databases

EcoGeneiEG14407. yjdP.

Phylogenomic databases

HOGENOMiHOG000126975.
OMAiWQREVND.

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-1541.
ECOL316407:JW5890-MONOMER.

Miscellaneous databases

PROiQ6BEX5.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYJDP_ECOLI
AccessioniPrimary (citable) accession number: Q6BEX5
Secondary accession number(s): Q2M6L2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 21, 2006
Last sequence update: August 16, 2004
Last modified: September 7, 2016
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.