Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized ABC transporter ATP-binding protein YtfR

Gene

ytfR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi42 – 49ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YTFR-MONOMER
MetaCyc:YTFR-MONOMER

Protein family/group databases

TCDBi3.A.1.2.25 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YtfR
Gene namesi
Name:ytfR
Synonyms:ytfS
Ordered Locus Names:b4485, JW5752
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG12518 ytfR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931751 – 500Uncharacterized ABC transporter ATP-binding protein YtfRAdd BLAST500

Proteomic databases

PaxDbiQ6BEX0
PRIDEiQ6BEX0

Interactioni

Protein-protein interaction databases

BioGridi426187225 interactors.
DIPiDIP-48183N
STRINGi316385.ECDH10B_4423

Structurei

3D structure databases

ProteinModelPortaliQ6BEX0
SMRiQ6BEX0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini10 – 245ABC transporter 1PROSITE-ProRule annotationAdd BLAST236
Domaini259 – 497ABC transporter 2PROSITE-ProRule annotationAdd BLAST239

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105C2J Bacteria
COG1129 LUCA
InParanoidiQ6BEX0
KOiK02056
OMAiPQDRHKH
PhylomeDBiQ6BEX0

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 2 hits
SMARTiView protein in SMART
SM00382 AAA, 2 hits
SUPFAMiSSF52540 SSF52540, 2 hits
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 2 hits

Sequencei

Sequence statusi: Complete.

Q6BEX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTDQHQEIL RTEGLSKFFP GVKALDNVDF SLRRGEIMAL LGENGAGKST
60 70 80 90 100
LIKALTGVYH ADRGTIWLEG QAISPKNTAH AQQLGIGTVY QEVNLLPNMS
110 120 130 140 150
VADNLFIGRE PKRFGLLRRK EMEKRATELM ASYGFSLDVR EPLNRFSVAM
160 170 180 190 200
QQIVAICRAI DLSAKVLILD EPTASLDTQE VELLFDLMRQ LRDRGVSLIF
210 220 230 240 250
VTHFLDQVYQ VSDRITVLRN GSFVGCRETC ELPQIELVKM MLGRELDTHA
260 270 280 290 300
LQRAGRTLLS DKPVAAFKNY GKKGTIAPFD LEVRPGEIVG LAGLLGSGRT
310 320 330 340 350
ETAEVIFGIK PADSGTALIK GKPQNLRSPH QASVLGIGFC PEDRKTDGII
360 370 380 390 400
AAASVRENII LALQAQRGWL RPISRKEQQE IAERFIRQLG IRTPSTEQPI
410 420 430 440 450
EFLSGGNQQK VLLSRWLLTR PQFLILDEPT RGIDVGAHAE IIRLIETLCA
460 470 480 490 500
DGLALLVISS ELEELVGYAD RVIIMRDRKQ VAEIPLAELS VPAIMNAIAA
Length:500
Mass (Da):55,260
Last modified:August 16, 2004 - v1
Checksum:i251FE62D4FADF959
GO

Sequence cautioni

The sequence AAA97126 differs from that shown. Reason: Frameshift at position 369.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U14003 Genomic DNA Translation: AAA97125.1 Frameshift.
U14003 Genomic DNA Translation: AAA97126.1 Frameshift.
U00096 Genomic DNA Translation: AAT48244.1
AP009048 Genomic DNA Translation: BAE78229.1
PIRiS56454
S56455
RefSeqiWP_000205805.1, NZ_LN832404.1
YP_026286.1, NC_000913.3

Genome annotation databases

EnsemblBacteriaiAAT48244; AAT48244; b4485
BAE78229; BAE78229; BAE78229
GeneIDi2847725
KEGGiecj:JW5752
eco:b4485
PATRICifig|1411691.4.peg.2473

Similar proteinsi

Entry informationi

Entry nameiYTFR_ECOLI
AccessioniPrimary (citable) accession number: Q6BEX0
Secondary accession number(s): P39326, P39327, Q2M677
Entry historyiIntegrated into UniProtKB/Swiss-Prot: October 11, 2004
Last sequence update: August 16, 2004
Last modified: March 28, 2018
This is version 106 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome