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Protein

50S ribosomal protein L13, chloroplastic

Gene

rpl13

Organism
Gracilaria tenuistipitata var. liui (Red alga)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13, chloroplasticUniRule annotation
Gene namesi
Name:rpl13UniRule annotation
Ordered Locus Names:Grc000079
Encoded oniPlastid; Chloroplast
OrganismiGracilaria tenuistipitata var. liui (Red alga)
Taxonomic identifieri285951 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaFlorideophyceaeGracilarialesGracilariaceaeGracilaria

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002772071 – 14350S ribosomal protein L13, chloroplasticAdd BLAST143

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotation

Structurei

3D structure databases

ProteinModelPortaliQ6B8X5.
SMRiQ6B8X5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotation

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR023563. Ribosomal_L13_CS.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.
PROSITEiView protein in PROSITE
PS00783. RIBOSOMAL_L13. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6B8X5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNKTYLAPTK NYSTWYIIDA KNKNLGRLSS KIAKLLRGKN SISFTPYVNN
60 70 80 90 100
KIYIILINSR SINVTGKKFV QKTYKRHSGY PGGLKVQKFN EILNQRPNRI
110 120 130 140
LEKSIKGMLP KGILGRQLFR QLKIYPDNIH PHESQQPKII TFI
Length:143
Mass (Da):16,589
Last modified:September 13, 2004 - v1
Checksum:iA2BDEE1AA81E7AE8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AY673996 Genomic DNA. Translation: AAT79660.1.
RefSeqiYP_063585.1. NC_006137.1.

Genome annotation databases

GeneIDi2943932.

Similar proteinsi

Entry informationi

Entry nameiRK13_GRATL
AccessioniPrimary (citable) accession number: Q6B8X5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 6, 2007
Last sequence update: September 13, 2004
Last modified: October 25, 2017
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)

Miscellaneousi

Documents

  1. Ribosomal proteins
    Ribosomal proteins families and list of entries
  2. SIMILARITY comments
    Index of protein domains and families