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Protein
Submitted name:

WDR6 protein

Gene

WDR6

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

SignaLinkiQ6AZD6.

Names & Taxonomyi

Protein namesi
Submitted name:
WDR6 proteinImported
Gene namesi
Name:WDR6Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

PTM / Processingi

Proteomic databases

PaxDbiQ6AZD6.

Expressioni

Gene expression databases

BgeeiQ6AZD6.

Interactioni

Protein-protein interaction databases

STRINGi9606.ENSP00000378857.

Structurei

3D structure databases

ProteinModelPortaliQ6AZD6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiKOG0974. Eukaryota.
ENOG410ZJ6J. LUCA.
HOVERGENiHBG071036.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 3 hits.

Sequencei

Sequence statusi: Fragment.

Q6AZD6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VVWNPRSHEK LHIVNCGGGH RSWAFSDTEA AMAFAYLKDG DVMLYRALGG
60 70 80 90 100
CTRPHVILRE GLHGREITCV KRVGTITLGP EYGVPSFMQP DDLEPGSEGP
110 120 130 140 150
DLTDIVITCS EDTTVCVLAL PTTTGSAHAL TAVCNHISSV RAVAVWGIGT
160 170 180 190 200
PGGPQDPQPG LTAHVVSAGG RAEMHCFSIM VTPDPSTPSR LACHVMHLSS
210 220 230 240 250
HRLDEYWDRQ RNRHRMVKVD PETRYMSLAV CELDQPGLGP LVAAACSDGA
260 270 280 290 300
VRLFLLQDSG RILQLLAETF HHKRCVLKVH SFTHEAPNQR RRLLLCSAAT
310 320 330 340 350
DGSLAFWDLT TMLDHDSTVL EPPVDPGLPY RLGTPSLTLQ AHSCGINSLH
360 370 380 390 400
TLPTREGHHL VASGSEDGSL HVFVLAVEML QLEEAVGEAG LVPQLRVLEE
410 420 430 440 450
YSVPCAHAAH VTGLKILSPS IMVSASIDQR LTFWRLGHGE PTFMNSTVFH
460 470 480
VPDVADMDCW PVSPEFGHRC ALGGQGLEVY NWYD
Length:484
Mass (Da):52,716
Last modified:September 13, 2004 - v1
Checksum:i56944220A5B6A267
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei1 – 11Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC078176 mRNA. Translation: AAH78176.1.
UniGeneiHs.654815.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC078176 mRNA. Translation: AAH78176.1.
UniGeneiHs.654815.

3D structure databases

ProteinModelPortaliQ6AZD6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9606.ENSP00000378857.

Proteomic databases

PaxDbiQ6AZD6.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Phylogenomic databases

eggNOGiKOG0974. Eukaryota.
ENOG410ZJ6J. LUCA.
HOVERGENiHBG071036.

Enzyme and pathway databases

SignaLinkiQ6AZD6.

Miscellaneous databases

ChiTaRSiWDR6. human.

Gene expression databases

BgeeiQ6AZD6.

Family and domain databases

Gene3Di2.130.10.10. 2 hits.
InterProiIPR015943. WD40/YVTN_repeat-like_dom.
IPR001680. WD40_repeat.
IPR017986. WD40_repeat_dom.
[Graphical view]
PfamiPF00400. WD40. 1 hit.
[Graphical view]
SMARTiSM00320. WD40. 3 hits.
[Graphical view]
SUPFAMiSSF50978. SSF50978. 3 hits.
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M.
    , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: UterusImported.

Entry informationi

Entry nameiQ6AZD6_HUMAN
AccessioniPrimary (citable) accession number: Q6AZD6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: March 16, 2016
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.