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Q6AYP0 (ALLC_RAT) Reviewed, UniProtKB/Swiss-Prot

Last modified November 16, 2011. Version 57. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Probable allantoicase
EC=3.5.3.4
Alternative name(s):
Allantoate amidinohydrolase
Gene names
Name:Allc
OrganismRattus norvegicus (Rat)
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length413 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Function

The function of this enzyme is unclear as allantoicase activity is not known to exist in mammals.

Catalytic activity

Allantoate + H2O = (S)-ureidoglycolate + urea.

Sequence similarities

Belongs to the allantoicase family.

Ontologies

Keywords
   Molecular functionHydrolase
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Molecular functionallantoicase activity

Inferred from electronic annotation. Source: EC

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 413413Probable allantoicase
PRO_0000205908

Experimental info

Sequence conflict2271V → G in AAM74035. Ref.2
Sequence conflict2581R → S in AAM74035. Ref.2

Sequences

Sequence LengthMass (Da)Tools
Q6AYP0 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 58DF636B0566B747

FASTA41346,037
        10         20         30         40         50         60 
MADTPKEGKL TRFLDFTQLI DLASECVGGK VLFATDDFFG PAENLIKSNN PSFKENEYTE 

        70         80         90        100        110        120 
FGKWVDGWET RRKRIPGHDW CVIQLGIQGI IRGIDVDISY FSGNYAPRMS IQAANLSEDT 

       130        140        150        160        170        180 
VTNIPPRGVK MGAAATSEEF VAITELKSHS WDYLVPMSEL KPGDPDSSHN YFFVNSQQRW 

       190        200        210        220        230        240 
THIRLNIFPD GGVARLRVYG TGQRDWAALD STEPVDLVAI AFGGVCVGFS NAHFGHPNNM 

       250        260        270        280        290        300 
IGVGDPKSIA DGWETARRLD RPPVLEGNEN GFLQVPGCEW AVFRLAHPGV ITQIEIDTKY 

       310        320        330        340        350        360 
FKGNSPDSCK VDGCILTTLE EEDMIRQKWS LPAHKWKPLL PVTKLTPNQN HLLDSLTLEL 

       370        380        390        400        410 
QDVITHARIT IAPDGGVSRL RLKGFPSSIC LLRPLREKPM LRFSLKAGFR ANL

« Hide

References

« Hide 'large scale' references
[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis.
[2]"Selective pressure on the allantoicase gene during vertebrate evolution."
Vigetti D., Binelli G., Monetti C., Prati M., Bernardini G., Gornati R.
J. Mol. Evol. 57:650-658(2003) [PubMed: 14745534] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 66-259.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC078971 mRNA. Translation: AAH78971.1.
AF480062 mRNA. Translation: AAM74035.1.
IPIIPI00464761.
RefSeqNP_001013055.1. NM_001013037.1.
UniGeneRn.92436.

3D structure databases

ProteinModelPortalQ6AYP0.
ModBaseSearch...

Protein-protein interaction databases

STRINGQ6AYP0.

Proteomic databases

PRIDEQ6AYP0.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID246758.
KEGGrno:246758.
NMPDRfig|10116.3.peg.24954.

Organism-specific databases

CTD55821.
RGD621804. Allc.

Phylogenomic databases

eggNOGroNOG12111.
GeneTreeENSGT00390000001793.
HOVERGENHBG004209.
OrthoDBEOG4SJ5DT.
PhylomeDBQ6AYP0.

Gene expression databases

GenevestigatorQ6AYP0.

Family and domain databases

InterProIPR005164. Allantoicase.
IPR015908. Allantoicase_dom.
IPR008979. Galactose-bd-like.
[Graphical view]
KOK01477.
PANTHERPTHR12045. Allantoicase. 1 hit.
PfamPF03561. Allantoicase. 2 hits.
[Graphical view]
SUPFAMSSF49785. Gal_bind_like. 2 hits.
TIGRFAMsTIGR02961. Allantoicase. 1 hit.
ProtoNetSearch...

Other

NextBio623816.

Entry information

Entry nameALLC_RAT
AccessionPrimary (citable) accession number: Q6AYP0
Secondary accession number(s): Q8K470
Entry history
Integrated into UniProtKB/Swiss-Prot: September 13, 2005
Last sequence update: September 13, 2004
Last modified: November 16, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

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