Q6AYP0 (ALLC_RAT) Reviewed, UniProtKB/Swiss-Prot
Last modified
November 16, 2011.
Version 57.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Probable allantoicase EC=3.5.3.4 Alternative name(s): Allantoate amidinohydrolase | ||
| Gene names |
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| Organism | Rattus norvegicus (Rat) | ||
| Taxonomic identifier | 10116 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 413 AA. |
| Sequence status | Complete. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Function | The function of this enzyme is unclear as allantoicase activity is not known to exist in mammals. |
| Catalytic activity | Allantoate + H2O = (S)-ureidoglycolate + urea. |
| Sequence similarities | Belongs to the allantoicase family. |
Ontologies
| Keywords | |
|---|---|
| Molecular function | Hydrolase |
| Technical term | Complete proteome Reference proteome |
| Gene Ontology (GO) | |
| Molecular function | allantoicase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
| [2] | "Selective pressure on the allantoicase gene during vertebrate evolution." Vigetti D., Binelli G., Monetti C., Prati M., Bernardini G., Gornati R. J. Mol. Evol. 57:650-658(2003) [PubMed: 14745534] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [MRNA] OF 66-259. |
| + | Additional computationally mapped references. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | BC078971 mRNA. Translation: AAH78971.1. AF480062 mRNA. Translation: AAM74035.1. |
| IPI | IPI00464761. |
| RefSeq | NP_001013055.1. NM_001013037.1. |
| UniGene | Rn.92436. |
3D structure databases | |
| ProteinModelPortal | Q6AYP0. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q6AYP0. |
Proteomic databases | |
| PRIDE | Q6AYP0. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 246758. |
| KEGG | rno:246758. |
| NMPDR | fig|10116.3.peg.24954. |
Organism-specific databases | |
| CTD | 55821. |
| RGD | 621804. Allc. |
Phylogenomic databases | |
| eggNOG | roNOG12111. |
| GeneTree | ENSGT00390000001793. |
| HOVERGEN | HBG004209. |
| OrthoDB | EOG4SJ5DT. |
| PhylomeDB | Q6AYP0. |
Gene expression databases | |
| Genevestigator | Q6AYP0. |
Family and domain databases | |
| InterPro | IPR005164. Allantoicase. IPR015908. Allantoicase_dom. IPR008979. Galactose-bd-like. [Graphical view] |
| KO | K01477. |
| PANTHER | PTHR12045. Allantoicase. 1 hit. |
| Pfam | PF03561. Allantoicase. 2 hits. [Graphical view] |
| SUPFAM | SSF49785. Gal_bind_like. 2 hits. |
| TIGRFAMs | TIGR02961. Allantoicase. 1 hit. |
| ProtoNet | Search... |
Other | |
| NextBio | 623816. |
Entry information
| Entry name | ALLC_RAT | ||||||||
| Accession | Primary (citable) accession number: Q6AYP0 Secondary accession number(s): Q8K470 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Chordata Protein Annotation Program | ||||||||
Relevant documents
| SIMILARITY comments Index of protein domains and families |

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