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Q6AYF6

- GL8D1_RAT

UniProt

Q6AYF6 - GL8D1_RAT

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Protein

Glycosyltransferase 8 domain-containing protein 1

Gene

Glt8d1

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Names & Taxonomyi

Protein namesi
Recommended name:
Glycosyltransferase 8 domain-containing protein 1 (EC:2.4.1.-)
Gene namesi
Name:Glt8d1
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
ProteomesiUP000002494: Chromosome 16

Organism-specific databases

RGDi1359293. Glt8d1.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Topological domaini1 – 55CytoplasmicSequence Analysis
Transmembranei6 – 2621Helical; Signal-anchor for type II membrane proteinSequence AnalysisAdd
BLAST
Topological domaini27 – 371345LumenalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 371371Glycosyltransferase 8 domain-containing protein 1PRO_0000288530Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi257 – 2571N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Proteomic databases

PaxDbiQ6AYF6.

Expressioni

Gene expression databases

ExpressionAtlasiQ6AYF6. baseline.
GenevestigatoriQ6AYF6.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000024624.

Structurei

3D structure databases

ProteinModelPortaliQ6AYF6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyltransferase 8 family.Curated

Keywords - Domaini

Signal-anchor, Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG74598.
GeneTreeiENSGT00390000016670.
HOGENOMiHOG000112730.
HOVERGENiHBG055240.
InParanoidiQ6AYF6.
OrthoDBiEOG7RBZ8R.

Family and domain databases

Gene3Di3.90.550.10. 1 hit.
InterProiIPR002495. Glyco_trans_8.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamiPF01501. Glyco_transf_8. 1 hit.
[Graphical view]
SUPFAMiSSF53448. SSF53448. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6AYF6-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSFRKVTIII WALAVILFLL ALHHNFLSLS SLLRNDVSDS GIVGLQPIDF
60 70 80 90 100
TANFHQHPVN ERQEEIPVVI AASEDRLGGT IAAINSIHQN TRSNVIFYIV
110 120 130 140 150
TFNRTADHLR SWLNSGSLKS IRYKIVNFDT KLLEGKVKED PDQGESMKPL
160 170 180 190 200
TFARFYLPIL VPSAKKAIYM DDDVIVQGDI LALYNTPLKP GHAAAFSEDC
210 220 230 240 250
DSASTKVMIR GAGNQYNYIG YLDYKKERIR KLSMKASTCS FNPGVFVANL
260 270 280 290 300
TEWKRQNVTN QLEKWMKLNV EEGLYSRTLA GSITTPPLLI VFYQQHSTID
310 320 330 340 350
PMWNVRHLGS SAGKRYSPQF VKAAKLLHWN GHFKPWGRAA SYADVWEKWY
360 370
IPDPTGKFSL IRRHMDTSNI K
Length:371
Mass (Da):42,135
Last modified:September 13, 2004 - v1
Checksum:i7C56790EF66FE4EF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079066 mRNA. Translation: AAH79066.1.
RefSeqiNP_001007684.1. NM_001007683.1.
UniGeneiRn.91636.

Genome annotation databases

EnsembliENSRNOT00000013291; ENSRNOP00000013291; ENSRNOG00000018179.
GeneIDi306253.
KEGGirno:306253.
UCSCiRGD:1359293. rat.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079066 mRNA. Translation: AAH79066.1 .
RefSeqi NP_001007684.1. NM_001007683.1.
UniGenei Rn.91636.

3D structure databases

ProteinModelPortali Q6AYF6.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 10116.ENSRNOP00000024624.

Proteomic databases

PaxDbi Q6AYF6.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSRNOT00000013291 ; ENSRNOP00000013291 ; ENSRNOG00000018179 .
GeneIDi 306253.
KEGGi rno:306253.
UCSCi RGD:1359293. rat.

Organism-specific databases

CTDi 55830.
RGDi 1359293. Glt8d1.

Phylogenomic databases

eggNOGi NOG74598.
GeneTreei ENSGT00390000016670.
HOGENOMi HOG000112730.
HOVERGENi HBG055240.
InParanoidi Q6AYF6.
OrthoDBi EOG7RBZ8R.

Miscellaneous databases

NextBioi 655689.

Gene expression databases

ExpressionAtlasi Q6AYF6. baseline.
Genevestigatori Q6AYF6.

Family and domain databases

Gene3Di 3.90.550.10. 1 hit.
InterProi IPR002495. Glyco_trans_8.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view ]
Pfami PF01501. Glyco_transf_8. 1 hit.
[Graphical view ]
SUPFAMi SSF53448. SSF53448. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Lung.

Entry informationi

Entry nameiGL8D1_RAT
AccessioniPrimary (citable) accession number: Q6AYF6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: September 13, 2004
Last modified: October 29, 2014
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3