Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Q6AYF6

- GL8D1_RAT

UniProt

Q6AYF6 - GL8D1_RAT

Protein

Glycosyltransferase 8 domain-containing protein 1

Gene

Glt8d1

Organism
Rattus norvegicus (Rat)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (13 Sep 2004)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Glycosyltransferase 8 domain-containing protein 1 (EC:2.4.1.-)
    Gene namesi
    Name:Glt8d1
    OrganismiRattus norvegicus (Rat)
    Taxonomic identifieri10116 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
    ProteomesiUP000002494: Chromosome 16

    Organism-specific databases

    RGDi1359293. Glt8d1.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW

    Keywords - Cellular componenti

    Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 371371Glycosyltransferase 8 domain-containing protein 1PRO_0000288530Add
    BLAST

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Glycosylationi257 – 2571N-linked (GlcNAc...)Sequence Analysis

    Keywords - PTMi

    Glycoprotein

    Proteomic databases

    PaxDbiQ6AYF6.

    Expressioni

    Gene expression databases

    GenevestigatoriQ6AYF6.

    Interactioni

    Protein-protein interaction databases

    STRINGi10116.ENSRNOP00000024624.

    Structurei

    3D structure databases

    ProteinModelPortaliQ6AYF6.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 55CytoplasmicSequence Analysis
    Topological domaini27 – 371345LumenalSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei6 – 2621Helical; Signal-anchor for type II membrane proteinSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyltransferase 8 family.Curated

    Keywords - Domaini

    Signal-anchor, Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiNOG74598.
    GeneTreeiENSGT00390000016670.
    HOGENOMiHOG000112730.
    HOVERGENiHBG055240.
    OrthoDBiEOG7RBZ8R.

    Family and domain databases

    Gene3Di3.90.550.10. 1 hit.
    InterProiIPR002495. Glyco_trans_8.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view]
    PfamiPF01501. Glyco_transf_8. 1 hit.
    [Graphical view]
    SUPFAMiSSF53448. SSF53448. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Q6AYF6-1 [UniParc]FASTAAdd to Basket

    « Hide

    MSFRKVTIII WALAVILFLL ALHHNFLSLS SLLRNDVSDS GIVGLQPIDF    50
    TANFHQHPVN ERQEEIPVVI AASEDRLGGT IAAINSIHQN TRSNVIFYIV 100
    TFNRTADHLR SWLNSGSLKS IRYKIVNFDT KLLEGKVKED PDQGESMKPL 150
    TFARFYLPIL VPSAKKAIYM DDDVIVQGDI LALYNTPLKP GHAAAFSEDC 200
    DSASTKVMIR GAGNQYNYIG YLDYKKERIR KLSMKASTCS FNPGVFVANL 250
    TEWKRQNVTN QLEKWMKLNV EEGLYSRTLA GSITTPPLLI VFYQQHSTID 300
    PMWNVRHLGS SAGKRYSPQF VKAAKLLHWN GHFKPWGRAA SYADVWEKWY 350
    IPDPTGKFSL IRRHMDTSNI K 371
    Length:371
    Mass (Da):42,135
    Last modified:September 13, 2004 - v1
    Checksum:i7C56790EF66FE4EF
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC079066 mRNA. Translation: AAH79066.1.
    RefSeqiNP_001007684.1. NM_001007683.1.
    UniGeneiRn.91636.

    Genome annotation databases

    EnsembliENSRNOT00000013291; ENSRNOP00000013291; ENSRNOG00000018179.
    GeneIDi306253.
    KEGGirno:306253.
    UCSCiRGD:1359293. rat.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    BC079066 mRNA. Translation: AAH79066.1 .
    RefSeqi NP_001007684.1. NM_001007683.1.
    UniGenei Rn.91636.

    3D structure databases

    ProteinModelPortali Q6AYF6.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 10116.ENSRNOP00000024624.

    Proteomic databases

    PaxDbi Q6AYF6.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSRNOT00000013291 ; ENSRNOP00000013291 ; ENSRNOG00000018179 .
    GeneIDi 306253.
    KEGGi rno:306253.
    UCSCi RGD:1359293. rat.

    Organism-specific databases

    CTDi 55830.
    RGDi 1359293. Glt8d1.

    Phylogenomic databases

    eggNOGi NOG74598.
    GeneTreei ENSGT00390000016670.
    HOGENOMi HOG000112730.
    HOVERGENi HBG055240.
    OrthoDBi EOG7RBZ8R.

    Miscellaneous databases

    NextBioi 655689.

    Gene expression databases

    Genevestigatori Q6AYF6.

    Family and domain databases

    Gene3Di 3.90.550.10. 1 hit.
    InterProi IPR002495. Glyco_trans_8.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view ]
    Pfami PF01501. Glyco_transf_8. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53448. SSF53448. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
      The MGC Project Team
      Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Tissue: Lung.

    Entry informationi

    Entry nameiGL8D1_RAT
    AccessioniPrimary (citable) accession number: Q6AYF6
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: May 29, 2007
    Last sequence update: September 13, 2004
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programChordata Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3