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Protein

Protein HGH1 homolog

Gene

Hgh1

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Protein HGH1 homolog
Gene namesi
Name:Hgh1
Synonyms:Brp16, Fam203a
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Chromosome 7

Organism-specific databases

RGDi1359226. Hgh1.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002733201 – 393Protein HGH1 homologAdd BLAST393

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei221PhosphoserineBy similarity1

Keywords - PTMi

Phosphoprotein

Proteomic databases

PaxDbiQ6AY79.
PRIDEiQ6AY79.

Expressioni

Gene expression databases

BgeeiENSRNOG00000029238.
GenevisibleiQ6AY79. RN.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000047549.

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi38 – 155Ala-richAdd BLAST118

Sequence similaritiesi

Belongs to the HGH1 family.Curated

Phylogenomic databases

eggNOGiKOG2973. Eukaryota.
ENOG410YNU7. LUCA.
GeneTreeiENSGT00390000016546.
HOVERGENiHBG060474.
InParanoidiQ6AY79.
OMAiCLLACEN.
OrthoDBiEOG091G0DXE.
PhylomeDBiQ6AY79.
TreeFamiTF313296.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiView protein in InterPro
IPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR007206. Protein_HGH1_C.
IPR007205. Protein_HGH1_N.
PfamiView protein in Pfam
PF04063. DUF383. 1 hit.
PF04064. DUF384. 1 hit.
SUPFAMiSSF48371. SSF48371. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6AY79-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRGPGVGSGL SGERGLSGKE AGADTEVAEL LPFLVPGARA DLQAAAAQHV
60 70 80 90 100
LALTGVGSGR TLLAGQTALL RALIDLAVAP IPAPSRDASR ALVNLAADPD
110 120 130 140 150
LHWQMLAADP ELPVRLLRCV LDPQWPWAEE LAAVLANLSR EPAPCAVLTE
160 170 180 190 200
KLVAAEPERL GLERLVSALC MPSYNASAPL HYLGPLLSNL SQQAEVRAFL
210 220 230 240 250
LDPDRCVVQR LLPLTQYTDS SVRRGGVVGT LRNCCFEHRH HKWLLGPQVD
260 270 280 290 300
ILPFLLLPLA GPEEFSEEEM EELPVDLQYL SPDKQREPDA DIRKMLIEAI
310 320 330 340 350
MLLTATAPGR KQVRDQGAYL ILRELYAWES EPDVRMACEK LIQVLIGDEP
360 370 380 390
EVGMENLLEV QVPEDVERQL QELDQQEQQE LAQERRDKGA PRT
Length:393
Mass (Da):43,132
Last modified:September 13, 2004 - v1
Checksum:i350A770F461F7D19
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079158 mRNA. Translation: AAH79158.1.
RefSeqiNP_001007708.1. NM_001007707.1.
UniGeneiRn.17102.

Genome annotation databases

EnsembliENSRNOT00000040981; ENSRNOP00000047549; ENSRNOG00000029238.
GeneIDi315094.
KEGGirno:315094.
UCSCiRGD:1359226. rat.

Similar proteinsi

Entry informationi

Entry nameiHGH1_RAT
AccessioniPrimary (citable) accession number: Q6AY79
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: September 13, 2004
Last modified: August 30, 2017
This is version 84 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families