Skip Header

Contribute Send feedback
Read comments (?) or add your own

Q6AY44 (Q6AY44_RAT) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 61. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesSubmitted name:
Mucolipin 3 EMBL AAH79200.1
Gene names
Name:Mcoln3 EMBL AAH79200.1 RGD 1308420
OrganismRattus norvegicus (Rat) EMBL AAH79200.1
Taxonomic identifier10116 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length553 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q6AY44 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 353F23A5DD44F2DC

FASTA55363,912
        10         20         30         40         50         60 
MANPEVVVSS CSSHQDESPC TFYPSSSQSE QLLLEDQMRR KLKFFFMNPC EKFWARGRKP 

        70         80         90        100        110        120 
WKLAIQILKI AMVTIQLVLF GLSNQMVVAF KEENTIAFKH LFLKGYMDRM DDTYAVYTQN 

       130        140        150        160        170        180 
DVYDQIIFAV TRYLQLRNIS VGNHAYENKG TKQSAMAVCQ HFYRQGTICP GNDTFDIDPE 

       190        200        210        220        230        240 
VETDCFLIEP EEAFHMGTPG ENKLNLTLDF HRLLTVELQF KLKAINLQTV RHQELPDCYD 

       250        260        270        280        290        300 
FTLTITFDNK AHSGRIKISL DNDISIRECK DWHVSGSIQK NTHYMMIFDA FVILTCLSSL 

       310        320        330        340        350        360 
VLCARSVIRG LQLQQEFVNF FLLHYKKEVS ASDQMEFING WYIMIIVSDI LTIVGSILKM 

       370        380        390        400        410        420 
EIQAKSLTSY DVCSILLGTS TMLVWLGVIR YLGFFAKYNL LILTLQAALP NVIRFCCCAA 

       430        440        450        460        470        480 
MIYLGYCFCG WIVLGPYHEK FRSLNKVSEC LFSLINGDDM FSTFAKMQQK SYLVWLFSRV 

       490        500        510        520        530        540 
YLYSFISLFI YMILSLFIAL ITDTYETIKH YQQDGFPETE LRKFIAECKD LPNSGKYRLE 

       550 
DDPPGSLFCC CKK

« Hide

References

[1]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Gerhard D.S., Wagner L., Feingold E.A., Shenmen C.M., Grouse L.H., Schuler G., Klein S.L., Old S., Rasooly R., Good P., Guyer M., Peck A.M., Derge J.G., Lipman D., Collins F.S., Jang W., Sherry S., Feolo M. expand/collapse author list , Misquitta L., Lee E., Rotmistrovsky K., Greenhut S.F., Schaefer C.F., Buetow K., Bonner T.I., Haussler D., Kent J., Kiekhaus M., Furey T., Brent M., Prange C., Schreiber K., Shapiro N., Bhat N.K., Hopkins R.F., Hsie F., Driscoll T., Soares M.B., Casavant T.L., Scheetz T.E., Brown-stein M.J., Usdin T.B., Toshiyuki S., Carninci P., Piao Y., Dudekula D.B., Ko M.S., Kawakami K., Suzuki Y., Sugano S., Gruber C.E., Smith M.R., Simmons B., Moore T., Waterman R., Johnson S.L., Ruan Y., Wei C.L., Mathavan S., Gunaratne P.H., Wu J., Garcia A.M., Hulyk S.W., Fuh E., Yuan Y., Sneed A., Kowis C., Hodgson A., Muzny D.M., McPherson J., Gibbs R.A., Fahey J., Helton E., Ketteman M., Madan A., Rodrigues S., Sanchez A., Whiting M., Madari A., Young A.C., Wetherby K.D., Granite S.J., Kwong P.N., Brinkley C.P., Pearson R.L., Bouffard G.G., Blakesly R.W., Green E.D., Dickson M.C., Rodriguez A.C., Grimwood J., Schmutz J., Myers R.M., Butterfield Y.S., Griffith M., Griffith O.L., Krzywinski M.I., Liao N., Morin R., Morrin R., Palmquist D., Petrescu A.S., Skalska U., Smailus D.E., Stott J.M., Schnerch A., Schein J.E., Jones S.J., Holt R.A., Baross A., Marra M.A., Clifton S., Makowski K.A., Bosak S., Malek J.
Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
Tissue: Testis EMBL AAH79200.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		BC079200 mRNA. Translation: AAH79200.1.
IPIIPI00464566.
RefSeqNP_001012059.1. NM_001012059.1.
UniGeneRn.214258.

3D structure databases

ProteinModelPortalQ6AY44.
ModBaseSearch...

Protein-protein interaction databases

IntActQ6AY44. 1 interaction.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID308022.
KEGGrno:308022.

Organism-specific databases

CTD55283.
RGD1308420. Mcoln3.

Phylogenomic databases

eggNOGNOG149591.
HOGENOMHOG000232158.
HOVERGENHBG052430.
InParanoidQ6AY44.
KOK04994.
OrthoDBEOG4R23TW.

Gene expression databases

GenevestigatorQ6AY44.

Family and domain databases

InterProIPR013122. PKD1_2_channel.
[Graphical view]
PfamPF08016. PKD_channel. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio658268.

Entry information

Entry nameQ6AY44_RAT
AccessionPrimary (citable) accession number: Q6AY44
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: April 3, 2013
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·Sequences·References·Cross-refs·Entry info