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Protein

Melanoma-associated antigen B16

Gene

Mageb16

Organism
Rattus norvegicus (Rat)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Keywords - Molecular functioni

Tumor antigen

Names & Taxonomyi

Protein namesi
Recommended name:
Melanoma-associated antigen B16
Alternative name(s):
MAGE-B16 antigen
Gene namesi
Name:Mageb16
OrganismiRattus norvegicus (Rat)
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeRattus
Proteomesi
  • UP000002494 Componenti: Unplaced

Organism-specific databases

RGDi1562365. Mageb16.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 360360Melanoma-associated antigen B16PRO_0000311930Add
BLAST

Proteomic databases

PaxDbiQ6AY37.
PRIDEiQ6AY37.

Interactioni

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064565.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini125 – 324200MAGEPROSITE-ProRule annotationAdd
BLAST

Compositional bias

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Compositional biasi327 – 3304Poly-Glu

Sequence similaritiesi

Contains 1 MAGE domain.PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG4562. Eukaryota.
ENOG4111S70. LUCA.
HOVERGENiHBG006315.
InParanoidiQ6AY37.
PhylomeDBiQ6AY37.

Family and domain databases

InterProiIPR002190. MHD_dom.
[Graphical view]
PfamiPF01454. MAGE. 1 hit.
[Graphical view]
SMARTiSM01373. MAGE. 1 hit.
[Graphical view]
PROSITEiPS50838. MAGE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6AY37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQKNPEYAA DHDHTREEMQ NLQVAPASSD VEEPCSSSHL MASSLKGHTS
60 70 80 90 100
EETQVPEDME EPCSSSQLLT ASNQEDPAYE TPSTSRGLQH PYVSSSESAK
110 120 130 140 150
GLGNKEMQGN SVIPPDQPDL PVMTIDGKVN FLVNYMLYKY QVKEMMSMND
160 170 180 190 200
IMTLIVREDE HHFHEILMRA SERMEMVFGL EVREVDPVNH FYALFIKLGL
210 220 230 240 250
TYDGMRADEY SFPKTGLLIL ILGVVFMKGN RATEEEIWEV LNPMGIYAGM
260 270 280 290 300
NHFIFGDPRE LLTDDFVREQ YLAYQPIANS DPIQYEYVWG PRAKAETSKM
310 320 330 340 350
KVLEFVAKVH GSDPTVFPSQ YEEALIEEEE RTLAMILEQA GPSSASGESS
360
SDMGSNVPHI
Length:360
Mass (Da):40,525
Last modified:September 13, 2004 - v1
Checksum:i8C3A48F616A9318B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079208 mRNA. Translation: AAH79208.1.
RefSeqiNP_001020184.1. NM_001025013.1.
UniGeneiRn.78836.

Genome annotation databases

GeneIDi317274.
KEGGirno:317274.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BC079208 mRNA. Translation: AAH79208.1.
RefSeqiNP_001020184.1. NM_001025013.1.
UniGeneiRn.78836.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi10116.ENSRNOP00000064565.

Proteomic databases

PaxDbiQ6AY37.
PRIDEiQ6AY37.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi317274.
KEGGirno:317274.

Organism-specific databases

CTDi139604.
RGDi1562365. Mageb16.

Phylogenomic databases

eggNOGiKOG4562. Eukaryota.
ENOG4111S70. LUCA.
HOVERGENiHBG006315.
InParanoidiQ6AY37.
PhylomeDBiQ6AY37.

Miscellaneous databases

NextBioi671551.
PROiQ6AY37.

Family and domain databases

InterProiIPR002190. MHD_dom.
[Graphical view]
PfamiPF01454. MAGE. 1 hit.
[Graphical view]
SMARTiSM01373. MAGE. 1 hit.
[Graphical view]
PROSITEiPS50838. MAGE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.

Entry informationi

Entry nameiMAGBG_RAT
AccessioniPrimary (citable) accession number: Q6AY37
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 4, 2007
Last sequence update: September 13, 2004
Last modified: May 11, 2016
This is version 43 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.