Reviewed,
UniProtKB/Swiss-Prot Q6AY30 (SCPDH_RAT)
Last modified
November 25, 2008.
Version 35.
History...
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90%,
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents
Names and origin
| Protein names | Recommended name: Probable saccharopine dehydrogenase EC=1.5.1.9 | ||
| Gene names |
| ||
| Organism | Rattus norvegicus (Rat) | ||
| Taxonomic identifier | 10116 [NCBI] | ||
| Taxonomic lineage | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus |
Protein attributes
| Sequence length | 429 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at transcript level. |
General annotation (Comments)
| Catalytic activity | N(6)-(L-1,3-dicarboxypropyl)-L-lysine + NAD(+) + H(2)O = L-glutamate + 2-aminoadipate 6-semialdehyde + NADH. |
| Pathway | |
| Sequence similarities | Belongs to the saccharopine dehydrogenase family. |
Ontologies
Keywords | |
|---|---|
| Ligand | NAD |
| Molecular function | Oxidoreductase |
Gene Ontology (GO) | |
| Biological process | oxidation reduction Inferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | binding Inferred from electronic annotation. Source: InterPro saccharopine dehydrogenase (NAD+, L-glutamate-forming) activityInferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||
Molecule processing | |||||||
|---|---|---|---|---|---|---|---|
| Chain | 1 – 429 | 429 | Probable saccharopine dehydrogenase | PRO_0000212843 | |||
Sequences
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References
| [1] | "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)." The MGC Project Team Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Tissue: Testis. |
Cross-references
Sequence databases | |
|---|---|
| BC079215 mRNA. Translation: AAH79215.1. | |
| RefSeq | NP_001014007.1. |
| UniGene | Rn.23989 |
3D structure databases | |
| ModBase | Search... |
PTM databases | |
| PhosphoSite | Q6AY30. |
Genome annotation databases | |
| Ensembl | ENSRNOG00000037984. Rattus norvegicus. [Contig view] |
| GeneID | 305021. |
| KEGG | rno:305021. |
| NMPDR | fig|10116.3.peg.9663. |
Organism-specific databases | |
| RGD | 1311440. Sccpdh. |
Phylogenomic databases | |
| HOVERGEN | Q6AY30. |
Gene expression databases | |
| ArrayExpress | Q6AY30. |
| GermOnline | ENSRNOG00000037984. Rattus norvegicus. |
Family and domain databases | |
| InterPro | IPR016040. NAD(P)-bd. IPR005097. Saccharopine_DHase. [Graphical view] |
| Gene3D | G3DSA:3.40.50.720. NAD(P)-bd. 1 hit. |
| Pfam | PF03435. Saccharop_dh. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Other Resources | |
| NextBio | 653990. |
Entry information
| Entry name | SCPDH_RAT | ||||||||
| Accession | Primary (citable) accession number: Q6AY30 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation project | HPI (Human Proteome Initiative) | ||||||||
Relevant documents
| PATHWAY comments Index of metabolic and biosynthesis pathways |
| SIMILARITY comments Index of protein domains and families |

Clusters with


