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Protein
Submitted name:

Probable lipopolysaccharide biosynthesis protein (WbpT)

Gene

DP0032

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-32-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Probable lipopolysaccharide biosynthesis protein (WbpT)Imported
Gene namesi
Ordered Locus Names:DP0032Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
Proteomesi
  • UP000000602 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0032.

Structurei

3D structure databases

ProteinModelPortaliQ6ASA2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini18 – 179162Glyco_trans_4-like_NInterPro annotationAdd
BLAST
Domaini191 – 343153Glycos_transf_1InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105CPK. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000077290.
OMAiWNIRQSL.
OrthoDBiEOG6091DG.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ASA2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNTKQKKVLH IITGLNDGGA EGVLTRLCLH SKAAIHVVIS LMDQGKYGTV
60 70 80 90 100
LKEAGVRVYC LGMNPGSPSI FKFFRLVKLI RVEQPDVVQT WMYHADLLGG
110 120 130 140 150
IAARLAGVRS VFWGIRHSTL EKGKSKCSTI MIARLCAFLS GWIPDKIICC
160 170 180 190 200
ANKALAVHAD IGYKKSNMSV IQNGYDLSRF KPDFGASIYM RQKLGLSQDE
210 220 230 240 250
FVLGTVGRFD PLKDHLNLLQ AFALVTKQVT HIRCVLVGKG LSVDNDVLMS
260 270 280 290 300
YIAELGLQDS VLLAGQCGNI PAVMNALDLH VLSSCSEGFP NVIAEAMACG
310 320 330 340 350
TPCVSTDVGD ALEIIGEPES CCPARNSEAL AGVIMNMVEE RKSHPDTWQA
360 370 380
RKDASAQRIA EQFSLQGMVH AYETCWRGIK
Length:380
Mass (Da):41,427
Last modified:September 13, 2004 - v1
Checksum:iAC7050A33A9E8AAF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG34761.1.
RefSeqiWP_011187277.1. NC_006138.1.

Genome annotation databases

EnsemblBacteriaiCAG34761; CAG34761; DP0032.
KEGGidps:DP0032.
PATRICi21709541. VBIDesPsy67261_0028.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG34761.1.
RefSeqiWP_011187277.1. NC_006138.1.

3D structure databases

ProteinModelPortaliQ6ASA2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP0032.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG34761; CAG34761; DP0032.
KEGGidps:DP0032.
PATRICi21709541. VBIDesPsy67261_0028.

Phylogenomic databases

eggNOGiENOG4105CPK. Bacteria.
COG0438. LUCA.
HOGENOMiHOG000077290.
OMAiWNIRQSL.
OrthoDBiEOG6091DG.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-32-MONOMER.

Family and domain databases

InterProiIPR001296. Glyco_trans_1.
IPR028098. Glyco_trans_4-like_N.
[Graphical view]
PfamiPF13439. Glyco_transf_4. 1 hit.
PF00534. Glycos_transf_1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LSv54 / DSM 12343Imported.

Entry informationi

Entry nameiQ6ASA2_DESPS
AccessioniPrimary (citable) accession number: Q6ASA2
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 8, 2016
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.