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Protein

Glutamate decarboxylase

Gene

DP0385

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-389-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:DP0385Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
ProteomesiUP000000602 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0385.

Structurei

3D structure databases

ProteinModelPortaliQ6ARB0.
SMRiQ6ARB0. Positions 21-458.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiRWQHARR.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6ARB0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLRCYPRTEK EKRMPLHNKR KNNIMDDIYA SSDLSIVLPK YKMPQKELDP
60 70 80 90 100
RHAYQMVHDE LMLDGNARQN LATFCQTWDD PEVHRLMDEC IDKNMIDKDE
110 120 130 140 150
YPQTAEIESR CVHILADLWN APDSANSLGC STTGSSEAAM LGGLALKKRW
160 170 180 190 200
SEKRKAAGKG TDRPNIVCGP VQICWHKFAR YWDVELREVP LEDQLYMTAE
210 220 230 240 250
EAVKRCDENT IGVIPTLGVT FTCVYEPVEE ICRALDQLQK ETGLDIPVHV
260 270 280 290 300
DGASGGFLAP FVDPDLKWDF RLKRVKSINA SGHKFGLAPL GVGWVLWRDK
310 320 330 340 350
EELPEDLIFW VNYLGGNMPT FALNFSRPGG QIIAQYYNFL RLGHEGYRKI
360 370 380 390 400
HQACYKTAQY LSSEVKKLGP FEIIYDGRGG IPAMSFSLQE GVAPGFNLFD
410 420 430 440 450
LSDRIRSRGW QIAAYSMPAN REDLVVMRIL VRHGFSRDLA DLLLKDLQHC
460 470
LEYFKKNPVI HQSSEEFSGS FKHS
Length:474
Mass (Da):54,088
Last modified:September 13, 2004 - v1
Checksum:i1F23CD853D7F0620
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35114.1.

Genome annotation databases

EnsemblBacteriaiCAG35114; CAG35114; DP0385.
KEGGidps:DP0385.
PATRICi21710337. VBIDesPsy67261_0422.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35114.1.

3D structure databases

ProteinModelPortaliQ6ARB0.
SMRiQ6ARB0. Positions 21-458.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP0385.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG35114; CAG35114; DP0385.
KEGGidps:DP0385.
PATRICi21710337. VBIDesPsy67261_0422.

Phylogenomic databases

HOGENOMiHOG000070228.
KOiK01580.
OMAiRWQHARR.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-389-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LSv54 / DSM 12343Imported.

Entry informationi

Entry nameiQ6ARB0_DESPS
AccessioniPrimary (citable) accession number: Q6ARB0
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: July 22, 2015
This is version 71 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.