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Q6ARB0 (Q6ARB0_DESPS) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 58. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Probable glutamate decarboxylase EMBL CAG35114.1
Gene names
Ordered Locus Names:DP0385 EMBL CAG35114.1
OrganismDesulfotalea psychrophila (strain LSv54 / DSM 12343) [Complete proteome] [HAMAP] EMBL CAG35114.1
Taxonomic identifier177439 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Deltaproteobacteria › Desulfobacterales › Desulfobulbaceae › Desulfotalea ›

Protein attributes

Sequence length474 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
   LigandPyridoxal phosphate RuleBase RU000382
   Molecular functionLyase RuleBase RU000382
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processglutamate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionglutamate decarboxylase activity

Inferred from electronic annotation. Source: InterPro

pyridoxal phosphate binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6ARB0 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 1F23CD853D7F0620

FASTA47454,088
        10         20         30         40         50         60 
MLRCYPRTEK EKRMPLHNKR KNNIMDDIYA SSDLSIVLPK YKMPQKELDP RHAYQMVHDE 

        70         80         90        100        110        120 
LMLDGNARQN LATFCQTWDD PEVHRLMDEC IDKNMIDKDE YPQTAEIESR CVHILADLWN 

       130        140        150        160        170        180 
APDSANSLGC STTGSSEAAM LGGLALKKRW SEKRKAAGKG TDRPNIVCGP VQICWHKFAR 

       190        200        210        220        230        240 
YWDVELREVP LEDQLYMTAE EAVKRCDENT IGVIPTLGVT FTCVYEPVEE ICRALDQLQK 

       250        260        270        280        290        300 
ETGLDIPVHV DGASGGFLAP FVDPDLKWDF RLKRVKSINA SGHKFGLAPL GVGWVLWRDK 

       310        320        330        340        350        360 
EELPEDLIFW VNYLGGNMPT FALNFSRPGG QIIAQYYNFL RLGHEGYRKI HQACYKTAQY 

       370        380        390        400        410        420 
LSSEVKKLGP FEIIYDGRGG IPAMSFSLQE GVAPGFNLFD LSDRIRSRGW QIAAYSMPAN 

       430        440        450        460        470 
REDLVVMRIL VRHGFSRDLA DLLLKDLQHC LEYFKKNPVI HQSSEEFSGS FKHS

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References

[1]"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments."
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Glockner F.O., Lupas A.N., Amann R., Klenk H.P.
Environ. Microbiol. 6:887-902(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CR522870 Genomic DNA. Translation: CAG35114.1.
RefSeqYP_064121.1. NC_006138.1.

3D structure databases

ProteinModelPortalQ6ARB0.
SMRQ6ARB0. Positions 21-458.
ModBaseSearch...

Protein-protein interaction databases

STRING177439.DP0385.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG35114; CAG35114; DP0385.
GeneID2945512.
KEGGdps:DP0385.
PATRIC21710337. VBIDesPsy67261_0422.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000070228.
KOK01580.
OMAFRWRNNA.
ProtClustDBCLSK928485.

Enzyme and pathway databases

BioCycDPSY177439:GJW5-389-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ6ARB0_DESPS
AccessionPrimary (citable) accession number: Q6ARB0
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: May 1, 2013
This is version 58 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info