Q6ARB0 (Q6ARB0_DESPS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Probable glutamate decarboxylase EMBL CAG35114.1

Gene names

Ordered Locus Names:

DP0385

Organism

Desulfotalea psychrophila [Complete proteome] [HAMAP]

Taxonomic identifier

84980 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Deltaproteobacteria › Desulfobacterales › Desulfobulbaceae › Desulfotalea

Protein attributes

Sequence length	474 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	glutamate metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	glutamate decarboxylase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6ARB0 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: 1F23CD853D7F0620	FASTA	474	54,088
	10 20 30 40 50 60 MLRCYPRTEK EKRMPLHNKR KNNIMDDIYA SSDLSIVLPK YKMPQKELDP RHAYQMVHDE 70 80 90 100 110 120 LMLDGNARQN LATFCQTWDD PEVHRLMDEC IDKNMIDKDE YPQTAEIESR CVHILADLWN 130 140 150 160 170 180 APDSANSLGC STTGSSEAAM LGGLALKKRW SEKRKAAGKG TDRPNIVCGP VQICWHKFAR 190 200 210 220 230 240 YWDVELREVP LEDQLYMTAE EAVKRCDENT IGVIPTLGVT FTCVYEPVEE ICRALDQLQK 250 260 270 280 290 300 ETGLDIPVHV DGASGGFLAP FVDPDLKWDF RLKRVKSINA SGHKFGLAPL GVGWVLWRDK 310 320 330 340 350 360 EELPEDLIFW VNYLGGNMPT FALNFSRPGG QIIAQYYNFL RLGHEGYRKI HQACYKTAQY 370 380 390 400 410 420 LSSEVKKLGP FEIIYDGRGG IPAMSFSLQE GVAPGFNLFD LSDRIRSRGW QIAAYSMPAN 430 440 450 460 470 REDLVVMRIL VRHGFSRDLA DLLLKDLQHC LEYFKKNPVI HQSSEEFSGS FKHS

References

[1]

"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments." Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P. Environ. Microbiol. 6:887-902(2004) [PubMed: 15305914] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CR522870 Genomic DNA. Translation: CAG35114.1.
RefSeq	YP_064121.1. NC_006138.1.
3D structure databases
ProteinModelPortal	Q6ARB0.
SMR	Q6ARB0. Positions 21-458.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2945512.
GenomeReviews	Gene locus DP0385 in contig CR522870_GR.
KEGG	dps:DP0385.
NMPDR	fig|177439.1.peg.385.
PATRIC	21710337. VBIDesPsy67261_0422.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG365574.
OMA	RRWQNKM.
ProtClustDB	CLSK928485.
Family and domain databases
InterPro	IPR010107. Glutamate_decarboxylase. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase_major_dom. IPR015421. PyrdxlP-dep_Trfase_major_sub1. [Graphical view]
Gene3D	G3DSA:3.40.640.10. PyrdxlP-dep_Trfase_major_sub1. 1 hit.
KO	K01580.
PANTHER	PTHR11999:SF1. Glu_decarb_GAD. 1 hit. PTHR11999. Pyridoxal_deC. 1 hit.
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6ARB0_DESPS

Accession

Primary (citable) accession number: Q6ARB0

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	December 14, 2011
This is version 47 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)