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Protein
Submitted name:

Chromosome

Gene

DP0962

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-990-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ChromosomeImported
Gene namesi
Ordered Locus Names:DP0962Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
ProteomesiUP000000602 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0962.

Structurei

3D structure databases

ProteinModelPortaliQ6APN3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000148076.
KOiK03406.
OMAiMTASHAN.
OrthoDBiEOG67HJTT.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6APN3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKDFSIKQKL VFAFAATSLI SIIILSSFLI YNIKNNAVNS FVSATNRELE
60 70 80 90 100
QIDNGFKFFI EGVATSIRAI SSNNLVRNLD VRLPNYTETT VKKQVNLNVL
110 120 130 140 150
DPRAVAIHEL FRQSEQADGA YLEAFMGTQY GGFASSSLGV PAAFDPRQRG
160 170 180 190 200
WYREALAKNE VCVTPAYMSV ITQKAVFSLA GPIKNMSGQT VGAVGIDVSL
210 220 230 240 250
SVMTDLIHQM KIGKTGFVVL LQGDGVVLAN PQHPEQNFKA IRDLNLPGYR
260 270 280 290 300
EIFTMSNGSM ELEESGETFL ATVYTSPQLG YKFVGMIAKS EVMAESKGLT
310 320 330 340 350
NILIAISLFL VGLFVVLGFF LAGSIIKPIS YTAAMLKDIA QGEGDLTMRL
360 370 380 390 400
QIKNKDEMGE LAHWFNAFVE HLQKIIGQIK ENSDGVNVAA EGLTGISVEL
410 420 430 440 450
TGSAKDTTLR SSNVASAAEE MNINLNNVAA AMEQSATNTA MVASAAEQMT
460 470 480 490 500
ATINEIAQNA ESARAISDSA VQQSTQASTR MEELNASAVA IGKVTETITE
510 520 530 540 550
ISEQTNLLAL NATIEAARAG EAGKGFAVVA NEIKELAKQT AAATLNIKLQ
560 570 580 590 600
IEDVQNTTSV TAVEIGDVSR VIEKVNETVG AIATAVEEQS AATREIADNI
610 620 630 640 650
FQASEGIEAV NVNVSQSSAG SGEITENITL VNSDAEGIAG LSVNVAGSAQ
660
QLEEMAHELN EIVGKFKI
Length:668
Mass (Da):71,326
Last modified:September 13, 2004 - v1
Checksum:i6538D9FEA2AEE95C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35691.1.
RefSeqiWP_011188205.1. NC_006138.1.
YP_064698.1. NC_006138.1.

Genome annotation databases

EnsemblBacteriaiCAG35691; CAG35691; DP0962.
KEGGidps:DP0962.
PATRICi21711605. VBIDesPsy67261_1033.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35691.1.
RefSeqiWP_011188205.1. NC_006138.1.
YP_064698.1. NC_006138.1.

3D structure databases

ProteinModelPortaliQ6APN3.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP0962.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG35691; CAG35691; DP0962.
KEGGidps:DP0962.
PATRICi21711605. VBIDesPsy67261_1033.

Phylogenomic databases

HOGENOMiHOG000148076.
KOiK03406.
OMAiMTASHAN.
OrthoDBiEOG67HJTT.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-990-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LSv54 / DSM 12343Imported.

Entry informationi

Entry nameiQ6APN3_DESPS
AccessioniPrimary (citable) accession number: Q6APN3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: April 29, 2015
This is version 59 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.