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Protein
Submitted name:

Chromosome

Gene

DP0978

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1006-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ChromosomeImported
Gene namesi
Ordered Locus Names:DP0978Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
ProteomesiUP000000602 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0978.

Structurei

3D structure databases

ProteinModelPortaliQ6APL7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000148079.
KOiK03406.
OMAiNNITHMY.
OrthoDBiEOG6CGC8R.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6APL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFRDMSIG RRYLTIIFVL LAATTLILIT CSAIFLNRTV KHAEERELRG
60 70 80 90 100
HYEAIINSLE QKGRLAEALS ILMANIPEVQ ANFAARNRES LTEQLSPAFN
110 120 130 140 150
ILKEKFGARQ SQFHVPPATS FLRLHKPEKF GDDLSSFRNT VVNTNKTRQT
160 170 180 190 200
TVGLEQGLAG IGIRGVAPIF HQNQHLGSVE FGMTFGQPFF DEIKSQRSID
210 220 230 240 250
VGLHILRDGR VQTFASTLGR KPVVAQVLLE QALAGKSVIT RLKHKGQPYA
260 270 280 290 300
ILTDVVKDYS GKPIGVLEVA MNRSFYATEL LTANLTAAGI GILVLLIGIY
310 320 330 340 350
LSWRISLPIS AQLQQVVKVV ETIAEGDLSN SIGNHDENSG GEAGQVLKAV
360 370 380 390 400
KTMSHKFRQV LQELSLASKS LNQSMSETSH SMQNSNQAIE QQQLQTEGIS
410 420 430 440 450
SAIEEMITTV SEVSQSARAA SEMTQGANRS AENGKRTIDE TISVIETLGI
460 470 480 490 500
DMAQLQSSIN KLSGNSDDIG KIIDVIVNIA DQTNLLALNA AIEAARAGEA
510 520 530 540 550
GKGFAVVADE VRTLAQRTQD ATGEIRSMIE NLQQGTKQTS AAMALSSRQT
560 570 580 590 600
KESMAKIREA GTALNEITDC IEQINGMNLQ IASATEQQTA VSTAISQNVH
610 620 630
SISHIGEDNS NEMKKIVQHS EDVLVMAGQL DLQVSRFKL
Length:639
Mass (Da):69,516
Last modified:September 13, 2004 - v1
Checksum:i9166FC1B7E8AE0F4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35707.1.
RefSeqiWP_011188221.1. NC_006138.1.
YP_064714.1. NC_006138.1.

Genome annotation databases

EnsemblBacteriaiCAG35707; CAG35707; DP0978.
KEGGidps:DP0978.
PATRICi21711637. VBIDesPsy67261_1049.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35707.1.
RefSeqiWP_011188221.1. NC_006138.1.
YP_064714.1. NC_006138.1.

3D structure databases

ProteinModelPortaliQ6APL7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP0978.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG35707; CAG35707; DP0978.
KEGGidps:DP0978.
PATRICi21711637. VBIDesPsy67261_1049.

Phylogenomic databases

HOGENOMiHOG000148079.
KOiK03406.
OMAiNNITHMY.
OrthoDBiEOG6CGC8R.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1006-MONOMER.

Family and domain databases

InterProiIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LSv54 / DSM 12343Imported.

Entry informationi

Entry nameiQ6APL7_DESPS
AccessioniPrimary (citable) accession number: Q6APL7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: April 29, 2015
This is version 61 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.