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Q6APL7 (Q6APL7_DESPS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DP0978 EMBL CAG35707.1
OrganismDesulfotalea psychrophila (strain LSv54 / DSM 12343) [Complete proteome] [HAMAP] EMBL CAG35707.1
Taxonomic identifier177439 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea

Protein attributes

Sequence length639 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6APL7 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 9166FC1B7E8AE0F4

FASTA63969,516
        10         20         30         40         50         60 
MKAFRDMSIG RRYLTIIFVL LAATTLILIT CSAIFLNRTV KHAEERELRG HYEAIINSLE 

        70         80         90        100        110        120 
QKGRLAEALS ILMANIPEVQ ANFAARNRES LTEQLSPAFN ILKEKFGARQ SQFHVPPATS 

       130        140        150        160        170        180 
FLRLHKPEKF GDDLSSFRNT VVNTNKTRQT TVGLEQGLAG IGIRGVAPIF HQNQHLGSVE 

       190        200        210        220        230        240 
FGMTFGQPFF DEIKSQRSID VGLHILRDGR VQTFASTLGR KPVVAQVLLE QALAGKSVIT 

       250        260        270        280        290        300 
RLKHKGQPYA ILTDVVKDYS GKPIGVLEVA MNRSFYATEL LTANLTAAGI GILVLLIGIY 

       310        320        330        340        350        360 
LSWRISLPIS AQLQQVVKVV ETIAEGDLSN SIGNHDENSG GEAGQVLKAV KTMSHKFRQV 

       370        380        390        400        410        420 
LQELSLASKS LNQSMSETSH SMQNSNQAIE QQQLQTEGIS SAIEEMITTV SEVSQSARAA 

       430        440        450        460        470        480 
SEMTQGANRS AENGKRTIDE TISVIETLGI DMAQLQSSIN KLSGNSDDIG KIIDVIVNIA 

       490        500        510        520        530        540 
DQTNLLALNA AIEAARAGEA GKGFAVVADE VRTLAQRTQD ATGEIRSMIE NLQQGTKQTS 

       550        560        570        580        590        600 
AAMALSSRQT KESMAKIREA GTALNEITDC IEQINGMNLQ IASATEQQTA VSTAISQNVH 

       610        620        630 
SISHIGEDNS NEMKKIVQHS EDVLVMAGQL DLQVSRFKL 

« Hide

References

[1]"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments."
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P.
Environ. Microbiol. 6:887-902(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR522870 Genomic DNA. Translation: CAG35707.1.
RefSeqYP_064714.1. NC_006138.1.

3D structure databases

ProteinModelPortalQ6APL7.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING177439.DP0978.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG35707; CAG35707; DP0978.
GeneID2946929.
KEGGdps:DP0978.
PATRIC21711637. VBIDesPsy67261_1049.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148079.
KOK03406.
OMAGLEMGKN.
OrthoDBEOG6CGC8R.
ProtClustDBCLSK907473.

Enzyme and pathway databases

BioCycDPSY177439:GJW5-1006-MONOMER.

Family and domain databases

InterProIPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6APL7_DESPS
AccessionPrimary (citable) accession number: Q6APL7
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: February 19, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)