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Protein
Submitted name:

Chromosome

Gene

DP0979

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1007-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ChromosomeImported
Gene namesi
Ordered Locus Names:DP0979Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
ProteomesiUP000000602 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0979.

Structurei

3D structure databases

ProteinModelPortaliQ6APL6.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000102825.
KOiK03406.
OMAiFQRINDE.
OrthoDBiEOG6V4G9Z.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6APL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLTKLKNVQF TTKLFCATVC IAVLCVIVIT GVALNMASES LREFGKQAIT
60 70 80 90 100
DVHDTVRSSL LMYNKNTQAT LGENIRVFKQ EFSTKGELVL DRTNMRDQTL
110 120 130 140 150
INQVTGQQRR QKIPQLQLGD TILNGDTGYI DSVAHLLGAS ATIFQLVDDK
160 170 180 190 200
LLRVATTVKK ANGQRAVGTY IPSDSAVCRS ILAGNTFRGR AFVVSDWYLT
210 220 230 240 250
VYTPLYDKAG KLVGAIYVGR KMLNEQVADF IRNTHVDSGY FFVYSEDGKV
260 270 280 290 300
LVHPNRSYEN IEVLPVFRGV RDDDLVYEFN GTTRFAKVAY IEEWGVSLAV
310 320 330 340 350
SLEEEAITGG FVRSMVSTNI IVGFLVVLAS IIVSIFLVRS INAPLKELAA
360 370 380 390 400
KAVQVGEGDY TVDFQSENRD AIGQLTNALG MMVSKSRDVL GNIINSSQTL
410 420 430 440 450
HVSSGQLSGI SEEMLTAADT TTKIADEAMT NAEGTSENIN SISAAIEQSA
460 470 480 490 500
TNLDMIASAA EEMGSTIKEI AENSSRARFT TETAVETARK SQAGVQALGE
510 520 530 540 550
AARSIGTVTE TITEISEQTN LLALNATIEA ARAGEAGKGF AVVANEIKEL
560 570 580 590 600
ARETAQATEK IRTAITGIQK QTGEAVADID GISQVINEVN EIVSTIVAAV
610 620 630 640 650
EEQAVTTNEI AANVSQASVG INEINENVAN SSSMTHLVSE GVVSVRGRSL
660 670 680
EVKENSQRVN VSATDLSHLA EKLTELVSRF RIS
Length:683
Mass (Da):73,685
Last modified:September 13, 2004 - v1
Checksum:i648A61A2EAB8349D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35708.1.
RefSeqiWP_011188222.1. NC_006138.1.
YP_064715.1. NC_006138.1.

Genome annotation databases

EnsemblBacteriaiCAG35708; CAG35708; DP0979.
KEGGidps:DP0979.
PATRICi21711639. VBIDesPsy67261_1050.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG35708.1.
RefSeqiWP_011188222.1. NC_006138.1.
YP_064715.1. NC_006138.1.

3D structure databases

ProteinModelPortaliQ6APL6.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP0979.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG35708; CAG35708; DP0979.
KEGGidps:DP0979.
PATRICi21711639. VBIDesPsy67261_1050.

Phylogenomic databases

HOGENOMiHOG000102825.
KOiK03406.
OMAiFQRINDE.
OrthoDBiEOG6V4G9Z.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1007-MONOMER.

Family and domain databases

InterProiIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMiSSF103190. SSF103190. 1 hit.
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: LSv54 / DSM 12343Imported.

Entry informationi

Entry nameiQ6APL6_DESPS
AccessioniPrimary (citable) accession number: Q6APL6
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: May 27, 2015
This is version 60 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.