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Q6APL6 (Q6APL6_DESPS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DP0979 EMBL CAG35708.1
OrganismDesulfotalea psychrophila (strain LSv54 / DSM 12343) [Complete proteome] [HAMAP] EMBL CAG35708.1
Taxonomic identifier177439 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea

Protein attributes

Sequence length683 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processchemotaxis

Inferred from electronic annotation. Source: InterPro

   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6APL6 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 648A61A2EAB8349D

FASTA68373,685
        10         20         30         40         50         60 
MLTKLKNVQF TTKLFCATVC IAVLCVIVIT GVALNMASES LREFGKQAIT DVHDTVRSSL 

        70         80         90        100        110        120 
LMYNKNTQAT LGENIRVFKQ EFSTKGELVL DRTNMRDQTL INQVTGQQRR QKIPQLQLGD 

       130        140        150        160        170        180 
TILNGDTGYI DSVAHLLGAS ATIFQLVDDK LLRVATTVKK ANGQRAVGTY IPSDSAVCRS 

       190        200        210        220        230        240 
ILAGNTFRGR AFVVSDWYLT VYTPLYDKAG KLVGAIYVGR KMLNEQVADF IRNTHVDSGY 

       250        260        270        280        290        300 
FFVYSEDGKV LVHPNRSYEN IEVLPVFRGV RDDDLVYEFN GTTRFAKVAY IEEWGVSLAV 

       310        320        330        340        350        360 
SLEEEAITGG FVRSMVSTNI IVGFLVVLAS IIVSIFLVRS INAPLKELAA KAVQVGEGDY 

       370        380        390        400        410        420 
TVDFQSENRD AIGQLTNALG MMVSKSRDVL GNIINSSQTL HVSSGQLSGI SEEMLTAADT 

       430        440        450        460        470        480 
TTKIADEAMT NAEGTSENIN SISAAIEQSA TNLDMIASAA EEMGSTIKEI AENSSRARFT 

       490        500        510        520        530        540 
TETAVETARK SQAGVQALGE AARSIGTVTE TITEISEQTN LLALNATIEA ARAGEAGKGF 

       550        560        570        580        590        600 
AVVANEIKEL ARETAQATEK IRTAITGIQK QTGEAVADID GISQVINEVN EIVSTIVAAV 

       610        620        630        640        650        660 
EEQAVTTNEI AANVSQASVG INEINENVAN SSSMTHLVSE GVVSVRGRSL EVKENSQRVN 

       670        680 
VSATDLSHLA EKLTELVSRF RIS 

« Hide

References

[1]"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments."
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P.
Environ. Microbiol. 6:887-902(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR522870 Genomic DNA. Translation: CAG35708.1.
RefSeqYP_064715.1. NC_006138.1.

3D structure databases

ProteinModelPortalQ6APL6.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING177439.DP0979.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG35708; CAG35708; DP0979.
GeneID2946930.
KEGGdps:DP0979.
PATRIC21711639. VBIDesPsy67261_1050.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000102825.
KOK03406.
OMAGRIGRIM.
OrthoDBEOG6V4G9Z.

Enzyme and pathway databases

BioCycDPSY177439:GJW5-1007-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSPR00260. CHEMTRNSDUCR.
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6APL6_DESPS
AccessionPrimary (citable) accession number: Q6APL6
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)