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Q6APL0 (Q6APL0_DESPS) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 55. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DP0985 EMBL CAG35714.1
OrganismDesulfotalea psychrophila (strain LSv54 / DSM 12343) [Complete proteome] [HAMAP] EMBL CAG35714.1
Taxonomic identifier177439 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea

Protein attributes

Sequence length674 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6APL0 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: E43CB345EE0D1878

FASTA67472,742
        10         20         30         40         50         60 
MFSKLNLRSK MLLSILSVVV IAFTLTIGLV SNKANSIVKK EAFDKTEQIA FRYSGELKED 

        70         80         90        100        110        120 
IEEAMDAARI LAHSYEAILM GKKQPERELL DNSLRRILEK SPKFSGIWVM VDPKTIFTKH 

       130        140        150        160        170        180 
YSPWFHREGS SIVAAPTIES VAYEASLSNE FYTLPKRLGK EVLIEPYEDP DLHSLMTTAT 

       190        200        210        220        230        240 
VPIVYKGRCI GVVGIDIVLE GLTEMVTKIR PYGTGVASLI SNAGKYVAHP DKERVGKDIG 

       250        260        270        280        290        300 
ATKLLRKAKQ AIENGEIFTM ISYSETLKTD VYRVFVPSYI GNSDTPWSFS VEIPMERVLQ 

       310        320        330        340        350        360 
ESREMTYSCI ITGIISVLLA AIVIFLVSGT IVKPIKIAVA GLKDIAEGEG DLTMRLEVKS 

       370        380        390        400        410        420 
RDEIGELAIW FNTFIEKLQG IITEISENAN VVAGSSTDLS AIAVQISSGA ENTAVRANTV 

       430        440        450        460        470        480 
ATATEEMTTN LNNVAAAMEQ STTNTGMVAA AAEEMTSTIN EIAKNTEMAT HVTDKAVQKA 

       490        500        510        520        530        540 
KSASSKMSEL EEAAITISKV TEVINEISEQ TNLLALNATI EAARAGEAGK GFAVVANEIK 

       550        560        570        580        590        600 
ELANQTAKAT LDIKNQIEGV QKTTTTAVKE IDETSAVIDG VNDIVTIIAA AVEEQSTAIT 

       610        620        630        640        650        660 
EIVANISQVS QGISEVNENI NQSSAVAGEI SQEITQVNSE TSEISSGIGQ VNLSATKLNE 

       670 
MSAKLSAIVG MFKV 

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References

[1]"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments."
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P.
Environ. Microbiol. 6:887-902(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR522870 Genomic DNA. Translation: CAG35714.1.
RefSeqYP_064721.1. NC_006138.1.

3D structure databases

ProteinModelPortalQ6APL0.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING177439.DP0985.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG35714; CAG35714; DP0985.
GeneID2946947.
KEGGdps:DP0985.
PATRIC21711663. VBIDesPsy67261_1059.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148076.
KOK03406.
OMANTEMATH.
OrthoDBEOG6C2W9S.
ProtClustDBCLSK737193.

Enzyme and pathway databases

BioCycDPSY177439:GJW5-1016-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6APL0_DESPS
AccessionPrimary (citable) accession number: Q6APL0
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: February 19, 2014
This is version 55 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)