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Protein
Submitted name:

Related to methyl-accepting chemotaxis protein

Gene

DP0987

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionTransducerPROSITE-ProRule annotation

Enzyme and pathway databases

BioCyciDPSY177439:G1GHX-993-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
Related to methyl-accepting chemotaxis proteinImported
Gene namesi
Ordered Locus Names:DP0987Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
Proteomesi
  • UP000000602 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 30HelicalSequence analysisAdd BLAST19
Transmembranei305 – 327HelicalSequence analysisAdd BLAST23

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi177439.DP0987

Structurei

3D structure databases

ProteinModelPortaliQ6APK8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini329 – 383HAMPInterPro annotationAdd BLAST55
Domaini402 – 638Methyl-accepting transducerInterPro annotationAdd BLAST237
Domaini561 – 623T-SNARE coiled-coil homologyInterPro annotationAdd BLAST63

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili473 – 493Sequence analysisAdd BLAST21
Coiled coili613 – 633Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4105C8Q Bacteria
COG0840 LUCA
HOGENOMiHOG000148076
KOiK03406
OMAiGSEHIGN
OrthoDBiPOG091H0QRR

Family and domain databases

CDDicd06225 HAMP, 1 hit
InterProiView protein in InterPro
IPR033479 dCache_1
IPR003660 HAMP_dom
IPR004089 MCPsignal_dom
IPR029151 Sensor-like_sf
IPR000727 T_SNARE_dom
PfamiView protein in Pfam
PF02743 dCache_1, 1 hit
PF00015 MCPsignal, 1 hit
SMARTiView protein in SMART
SM00304 HAMP, 1 hit
SM00283 MA, 1 hit
SUPFAMiSSF103190 SSF103190, 1 hit
PROSITEiView protein in PROSITE
PS50111 CHEMOTAXIS_TRANSDUC_2, 1 hit
PS50885 HAMP, 1 hit
PS50192 T_SNARE, 1 hit

Sequencei

Sequence statusi: Complete.

Q6APK8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFANLNLRSK MLLAILSVVV IAFVVTITLV SNKANSIVKK EAFAKTEQIA
60 70 80 90 100
FRYSGEIRED IEEAMDAARI LAHSYEAILI SKTRPEKELL DSSLRHILKK
110 120 130 140 150
NNNFTGIWVA VEPNTIFETF YYPWFHRKEG NIVADPTTDL KDYEAAAAEE
160 170 180 190 200
YYALPKRLKR EVLIEPYEDP DIHTLMTSAA VPIIHNGRCI GVVGIDIVLD
210 220 230 240 250
ELTEMVRKIR PYETGVASLI SNAGKYVAYP DKERVGKDIG NTELLKKAKQ
260 270 280 290 300
AIRDGKIFTM SSYSEKLKTD TYRIFVPSYI GNSDSPWSFS VEIPMEKVLE
310 320 330 340 350
ESRNITYTCI ITGIISVLLT ALTIFFVSGS IVKPIKIAVA SLKDIAEGEG
360 370 380 390 400
DLTMRLEVKN RDEIGELAHW FNTFVEKLQG IIKQIGEDAN VVAGSSTDLS
410 420 430 440 450
SVAVQISLGA ENTASRTNSV ATATEEMTAN LSSVAAAMEQ STTNTGMVAA
460 470 480 490 500
AAEEMNATID EIAKNTEMAT RITDEAVQKA RSASSKMSEL EEAAITITKV
510 520 530 540 550
TEVINEISEQ TNLLALNATI EAARAGEAGK GFAVVANEIK ALAQQTAQAT
560 570 580 590 600
LDIKTQIEGV QQTTTTAVKE IDETSTVIDG VNDIVTIIAA AVEEQSTAIN
610 620 630 640 650
EIVTNISQAS QGIEEVNENI NQCSNVAGEI TREISQVNSE TGEISNGIGQ
660 670
VNLSAQKLNE MSAKLSTIVG MFKV
Length:674
Mass (Da):73,392
Last modified:September 13, 2004 - v1
Checksum:iACFFB43DF4282E6C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA Translation: CAG35716.1
RefSeqiWP_011188230.1, NC_006138.1

Genome annotation databases

EnsemblBacteriaiCAG35716; CAG35716; DP0987
KEGGidps:DP0987

Similar proteinsi

Entry informationi

Entry nameiQ6APK8_DESPS
AccessioniPrimary (citable) accession number: Q6APK8
Entry historyiIntegrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: February 28, 2018
This is version 76 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported