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Q6APK8 (Q6APK8_DESPS) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 54. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:DP0987 EMBL CAG35716.1
OrganismDesulfotalea psychrophila (strain LSv54 / DSM 12343) [Complete proteome] [HAMAP] EMBL CAG35716.1
Taxonomic identifier177439 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea

Protein attributes

Sequence length674 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Cellular_componentintegral component of membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionsignal transducer activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q6APK8 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: ACFFB43DF4282E6C

FASTA67473,392
        10         20         30         40         50         60 
MFANLNLRSK MLLAILSVVV IAFVVTITLV SNKANSIVKK EAFAKTEQIA FRYSGEIRED 

        70         80         90        100        110        120 
IEEAMDAARI LAHSYEAILI SKTRPEKELL DSSLRHILKK NNNFTGIWVA VEPNTIFETF 

       130        140        150        160        170        180 
YYPWFHRKEG NIVADPTTDL KDYEAAAAEE YYALPKRLKR EVLIEPYEDP DIHTLMTSAA 

       190        200        210        220        230        240 
VPIIHNGRCI GVVGIDIVLD ELTEMVRKIR PYETGVASLI SNAGKYVAYP DKERVGKDIG 

       250        260        270        280        290        300 
NTELLKKAKQ AIRDGKIFTM SSYSEKLKTD TYRIFVPSYI GNSDSPWSFS VEIPMEKVLE 

       310        320        330        340        350        360 
ESRNITYTCI ITGIISVLLT ALTIFFVSGS IVKPIKIAVA SLKDIAEGEG DLTMRLEVKN 

       370        380        390        400        410        420 
RDEIGELAHW FNTFVEKLQG IIKQIGEDAN VVAGSSTDLS SVAVQISLGA ENTASRTNSV 

       430        440        450        460        470        480 
ATATEEMTAN LSSVAAAMEQ STTNTGMVAA AAEEMNATID EIAKNTEMAT RITDEAVQKA 

       490        500        510        520        530        540 
RSASSKMSEL EEAAITITKV TEVINEISEQ TNLLALNATI EAARAGEAGK GFAVVANEIK 

       550        560        570        580        590        600 
ALAQQTAQAT LDIKTQIEGV QQTTTTAVKE IDETSTVIDG VNDIVTIIAA AVEEQSTAIN 

       610        620        630        640        650        660 
EIVTNISQAS QGIEEVNENI NQCSNVAGEI TREISQVNSE TGEISNGIGQ VNLSAQKLNE 

       670 
MSAKLSTIVG MFKV 

« Hide

References

[1]"The genome of Desulfotalea psychrophila, a sulfate-reducing bacterium from permanently cold Arctic sediments."
Rabus R., Ruepp A., Frickey T., Rattei T., Fartmann B., Stark M., Bauer M., Zibat A., Lombardot T., Becker I., Amann J., Gellner K., Teeling H., Leuschner W.D., Gloeckner F.-O., Lupas A.N., Amann R., Klenk H.-P.
Environ. Microbiol. 6:887-902(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: LSv54 / DSM 12343.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CR522870 Genomic DNA. Translation: CAG35716.1.
RefSeqYP_064723.1. NC_006138.1.

3D structure databases

ProteinModelPortalQ6APK8.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING177439.DP0987.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaCAG35716; CAG35716; DP0987.
GeneID2946949.
KEGGdps:DP0987.
PATRIC21711665. VBIDesPsy67261_1060.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMHOG000148076.
KOK03406.
OMANENINQC.
OrthoDBEOG67HJTT.

Enzyme and pathway databases

BioCycDPSY177439:GJW5-1018-MONOMER.

Family and domain databases

InterProIPR004010. Cache_domain.
IPR003660. HAMP_linker_domain.
IPR004089. MCPsignal_dom.
IPR029151. Sensor-like.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamPF02743. Cache_1. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
SMARTSM00304. HAMP. 1 hit.
SM00283. MA. 1 hit.
[Graphical view]
SUPFAMSSF103190. SSF103190. 1 hit.
PROSITEPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ6APK8_DESPS
AccessionPrimary (citable) accession number: Q6APK8
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 11, 2014
This is version 54 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)