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Protein
Submitted name:

Related to methyl-accepting chemotaxis protein (TlpA)

Gene

DP1899

Organism
Desulfotalea psychrophila (strain LSv54 / DSM 12343)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1960-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Related to methyl-accepting chemotaxis protein (TlpA)Imported
Gene namesi
Ordered Locus Names:DP1899Imported
OrganismiDesulfotalea psychrophila (strain LSv54 / DSM 12343)Imported
Taxonomic identifieri177439 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaDesulfobacteralesDesulfobulbaceaeDesulfotalea
Proteomesi
  • UP000000602 Componenti: Chromosome

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei187 – 21024HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi177439.DP1899.

Structurei

3D structure databases

ProteinModelPortaliQ6ALZ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini208 – 26053HAMPInterPro annotationAdd
BLAST
Domaini279 – 515237Methyl-accepting transducerInterPro annotationAdd
BLAST
Domaini446 – 50055T-SNARE coiled-coil homologyInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG4107R2Y. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000141446.
KOiK03406.
OMAiGQDILDY.
OrthoDBiPOG091H0QRR.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR025991. Chemoreceptor_zinc-bind_dom.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF13682. CZB. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q6ALZ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLSQQLVAS DIVNPMRLQS LLAQVERDHE VLLKKLARLV SVDKAFSGGT
60 70 80 90 100
DAHACNLGKW LNNMDTRNPE ILALTGETKR AHDQFHRAAA QVKEATKTGR
110 120 130 140 150
LVEAKELMES DVYPKSEKIF SLLTKMTKPV VTAYKKFRKM NSLLLEDAVV
160 170 180 190 200
YQDLVNTAID AIAVKAEAGA HRVATEAKSI AKNGEQLIII GIIVGVILAL
210 220 230 240 250
GLGVFLTILI TRPLSKGVEL ARRMAEGDMT QQMDVNQRDE IGLLAISLNE
260 270 280 290 300
MSTSLRGVIG DINQRVDVLD NSATELVNIS DDMARGVMDT ASRSTQVAGS
310 320 330 340 350
AEEMSANQNS VAAAMEEASV NVSMVAAAAE EMNATIGEIA ENSSKAKNIS
360 370 380 390 400
QQAVDRSRQA SQRVDELGTA AAEITRVTEA ITEISEQTNL LALNATIEAA
410 420 430 440 450
RAGEAGKGFA VVANEIKDLA QQTANATLDI KEKIDGIQQA TGVTVKEIDE
460 470 480 490 500
IRQVIADVDQ IVATIATAVE EQSVTTREIA INVSQASSGI TEVSENVASS
510 520 530 540 550
SAVAESISAE IAEVNSSAND MNISSSHVKT RAGELSGIAE ALKTVVGKFK

I
Length:551
Mass (Da):58,721
Last modified:September 13, 2004 - v1
Checksum:iF1EE4A297AD6AF87
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG36628.1.
RefSeqiWP_011189140.1. NC_006138.1.

Genome annotation databases

EnsemblBacteriaiCAG36628; CAG36628; DP1899.
KEGGidps:DP1899.
PATRICi21713726. VBIDesPsy67261_2059.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CR522870 Genomic DNA. Translation: CAG36628.1.
RefSeqiWP_011189140.1. NC_006138.1.

3D structure databases

ProteinModelPortaliQ6ALZ7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi177439.DP1899.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCAG36628; CAG36628; DP1899.
KEGGidps:DP1899.
PATRICi21713726. VBIDesPsy67261_2059.

Phylogenomic databases

eggNOGiENOG4107R2Y. Bacteria.
COG0840. LUCA.
HOGENOMiHOG000141446.
KOiK03406.
OMAiGQDILDY.
OrthoDBiPOG091H0QRR.

Enzyme and pathway databases

BioCyciDPSY177439:GJW5-1960-MONOMER.

Family and domain databases

CDDicd06225. HAMP. 1 hit.
InterProiIPR025991. Chemoreceptor_zinc-bind_dom.
IPR004090. Chemotax_Me-accpt_rcpt.
IPR003660. HAMP_dom.
IPR004089. MCPsignal_dom.
IPR000727. T_SNARE_dom.
[Graphical view]
PfamiPF13682. CZB. 1 hit.
PF00672. HAMP. 1 hit.
PF00015. MCPsignal. 1 hit.
[Graphical view]
PRINTSiPR00260. CHEMTRNSDUCR.
SMARTiSM00304. HAMP. 2 hits.
SM00283. MA. 1 hit.
[Graphical view]
PROSITEiPS50111. CHEMOTAXIS_TRANSDUC_2. 1 hit.
PS50885. HAMP. 1 hit.
PS50192. T_SNARE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ6ALZ7_DESPS
AccessioniPrimary (citable) accession number: Q6ALZ7
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: September 7, 2016
This is version 70 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.