Q6AFJ5 (RL32_LEIXX) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L32

Gene names

Name:	rpmF
Ordered Locus Names:	Lxx09790

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP]

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia › Leifsonia xyli › Leifsonia xyli subsp. xyli

Protein attributes

Sequence length	67 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the ribosomal protein L32P family.

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	large ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 67	67	50S ribosomal protein L32 HAMAP-Rule MF_00340		PRO_0000172354

Sequences

	Sequence		Length	Mass (Da)
	Q6AFJ5 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: FCC5B192C04B85AD	FASTA	67	7,507
	10 20 30 40 50 60 MAVPKRKQSR ANTHARRSQW KAEVPTLVKT VENGKVTYSL PHRAKVVEDS AGTALFLEYK GRKVADV

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT88850.1.
RefSeq	YP_061955.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AFJ5.
ModBase	Search...
Protein-protein interaction databases
STRING	281090.Lxx09790.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAT88850; AAT88850; Lxx09790.
GeneID	2938442.
KEGG	lxx:Lxx09790.
PATRIC	22335516. VBILeiXyl11655_1012.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	NOG303978.
HOGENOM	HOG000040268.
KO	K02911.
OMA	NALFLEY.
ProtClustDB	PRK01110.
Enzyme and pathway databases
BioCyc	LXYL281090:GH0X-937-MONOMER.
Family and domain databases
HAMAP	MF_00340. Ribosomal_L32.
InterPro	IPR002677. Ribosomal_L32p. IPR011332. Ribosomal_zn-bd_dom. [Graphical view]
Pfam	PF01783. Ribosomal_L32p. 1 hit. [Graphical view]
SUPFAM	SSF57829. Ribosomal_zn-bd. 1 hit.
TIGRFAMs	TIGR01031. rpmF_bact. 1 hit.
ProtoNet	Search...

Entry information

Entry name

RL32_LEIXX

Accession

Primary (citable) accession number: Q6AFJ5

Entry history

Integrated into UniProtKB/Swiss-Prot:	August 2, 2005
Last sequence update:	September 13, 2004
Last modified:	May 1, 2013
This is version 46 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program