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Protein
Submitted name:

Alanine racemase

Gene

alr

Organism
Leifsonia xyli subsp. xyli (strain CTCB07)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Cofactori

pyridoxal 5'-phosphateSAAS annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseSAAS annotation

Keywords - Ligandi

Pyridoxal phosphateSAAS annotation

Enzyme and pathway databases

BioCyciLXYL281090:GH0X-965-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alanine racemaseImported
Gene namesi
Name:alrImported
Ordered Locus Names:Lxx10330Imported
OrganismiLeifsonia xyli subsp. xyli (strain CTCB07)Imported
Taxonomic identifieri281090 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaMicrococcalesMicrobacteriaceaeLeifsonia
ProteomesiUP000001306 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi281090.Lxx10330.

Structurei

3D structure databases

ProteinModelPortaliQ6AFE8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01775.
OMAiDNTECKA.
OrthoDBiEOG6PP9NJ.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
[Graphical view]
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6AFE8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTPAPGVRRH AHIDLDAIVA NAISSGRPLT DSTADLRVDA YGHGLIPVAR
60 70 80 90 100
VLSSAGTGGF LVSRVEDAAT LADDGVPGRI LVGSTAVDAG ALLGPELFGL
110 120 130 140 150
DPRHPSRLAL RLVGEIVAVK RVAARRGVSY GYTYRTERPS TLVLVALGYA
160 170 180 190 200
DGLLRVASNR GPVQVGTVRG RVSGRIAMDQ FVVDIGDADT LPGDPVVVFG
210 220 230
DPGRGEPTVL DWADALGVAA PVITSRLGRR IERRYA
Length:236
Mass (Da):24,658
Last modified:September 13, 2004 - v1
Checksum:iADF8761B557A8DE8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016822 Genomic DNA. Translation: AAT88897.1.
RefSeqiWP_011185893.1. NC_006087.1.
YP_062002.1. NC_006087.1.

Genome annotation databases

EnsemblBacteriaiAAT88897; AAT88897; Lxx10330.
KEGGilxx:Lxx10330.
PATRICi22335628. VBILeiXyl11655_1068.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016822 Genomic DNA. Translation: AAT88897.1.
RefSeqiWP_011185893.1. NC_006087.1.
YP_062002.1. NC_006087.1.

3D structure databases

ProteinModelPortaliQ6AFE8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi281090.Lxx10330.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAT88897; AAT88897; Lxx10330.
KEGGilxx:Lxx10330.
PATRICi22335628. VBILeiXyl11655_1068.

Phylogenomic databases

KOiK01775.
OMAiDNTECKA.
OrthoDBiEOG6PP9NJ.

Enzyme and pathway databases

BioCyciLXYL281090:GH0X-965-MONOMER.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
InterProiIPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
[Graphical view]
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CTCB07Imported.

Entry informationi

Entry nameiQ6AFE8_LEIXX
AccessioniPrimary (citable) accession number: Q6AFE8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 24, 2015
This is version 75 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.