Q6AFE8 (Q6AFE8_LEIXX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AAT88897.1

Gene names

Name:	alr EMBL AAT88897.1
Ordered Locus Names:	Lxx10330

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP] EMBL AAT88897.1

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia › Leifsonia xyli › Leifsonia xyli subsp. xyli

Protein attributes

Sequence length	236 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS011079

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	isomerase activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6AFE8 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: ADF8761B557A8DE8	FASTA	236	24,658
	10 20 30 40 50 60 MTPAPGVRRH AHIDLDAIVA NAISSGRPLT DSTADLRVDA YGHGLIPVAR VLSSAGTGGF 70 80 90 100 110 120 LVSRVEDAAT LADDGVPGRI LVGSTAVDAG ALLGPELFGL DPRHPSRLAL RLVGEIVAVK 130 140 150 160 170 180 RVAARRGVSY GYTYRTERPS TLVLVALGYA DGLLRVASNR GPVQVGTVRG RVSGRIAMDQ 190 200 210 220 230 FVVDIGDADT LPGDPVVVFG DPGRGEPTVL DWADALGVAA PVITSRLGRR IERRYA

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT88897.1.
RefSeq	YP_062002.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AFE8.
ModBase	Search...
Protein-protein interaction databases
STRING	281090.Lxx10330.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAT88897; AAT88897; Lxx10330.
GeneID	2939766.
KEGG	lxx:Lxx10330.
PATRIC	22335628. VBILeiXyl11655_1068.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
OMA	DNTECKA.
ProtClustDB	CLSK392603.
Enzyme and pathway databases
BioCyc	LXYL281090:GH0X-987-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
InterPro	IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. [Graphical view]
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6AFE8_LEIXX

Accession

Primary (citable) accession number: Q6AFE8

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	May 1, 2013
This is version 59 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)