Q6AF05 (Q6AF05_LEIXX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Glutamate dehydrogenase PIRNR PIRNR000185

Gene names

Name:	gdhA EMBL AAT89040.1
Ordered Locus Names:	Lxx11950

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP]

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia

Protein attributes

Sequence length	450 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the Glu/Leu/Phe/Val dehydrogenases family. RuleBase RU004417 PIRNR PIRNR000185

Ontologies

Keywords
Molecular function	Oxidoreductase RuleBase RU004418 PIRNR PIRNR000185
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	cellular amino acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular function	nucleotide binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Sites
	Active site	126	1	By similarity PIRSR PIRSR000185-1

Sequences

	Sequence		Length	Mass (Da)
	Q6AF05 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: 34CB4105307F1387	FASTA	450	48,098
	10 20 30 40 50 60 MTPVLSTLLD DVLRRNAGEP EFHQATREVF GSLGPVIAAQ PRYTQAAVLE RLTEPERQLI 70 80 90 100 110 120 FRVPWTDDEG NVRVNRGFRV EFNSALGPFK GGLRFHPSVT LGTVKFLGFE QIFKNALTGL 130 140 150 160 170 180 PIGGGKGGSD FDPKGRSDAE VMRFCQSFMT ELYRHLGEYT DVPAGDIGVG GREIGYLFGQ 190 200 210 220 230 240 YKRITNRYES GVLTSKGIGW GGSLVRTEAT GYGSVFFAER MLATRGRDFT GVRVLVSGSG 250 260 270 280 290 300 NVALYAIEKV HQLGGTVVAC SDSSGVVYDR GGLDLDLLRQ IKENERGRLS DYAARRAAGS 310 320 330 340 350 360 EYRANGDIWA IAAQTPIDVA LLAATQNELD ATAAATLAQN GVIAVVEGAN MPCTPEAVHL 370 380 390 400 410 420 LRTAGVLFAP GKAANAGGVA TSALEMQQNA SRDAWSFEYA EGRLADIMAN IHDSCAETAE 430 440 450 KYGAPGDYVL GANIAGFVRV ADAMLALGVI

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed: 15305603] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT89040.1.
RefSeq	YP_062145.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AF05.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2940568.
GenomeReviews	Gene locus Lxx11950 in contig AE016822_GR.
KEGG	lxx:Lxx11950.
NMPDR	fig|281090.3.peg.640.
PATRIC	22335975. VBILeiXyl11655_1236.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG590661.
OMA	KGLTYGG.
ProtClustDB	PRK09414.
Family and domain databases
InterPro	IPR006095. Glu/Leu/Phe/Val_DH. IPR006096. Glu/Leu/Phe/Val_DH_C. IPR006097. Glu/Leu/Phe/Val_DH_dimer_dom. IPR014362. Glu_DH. IPR016040. NAD(P)-bd_dom. [Graphical view]
Gene3D	G3DSA:3.40.50.720. NAD(P)-bd. 1 hit.
KO	K00262.
Pfam	PF00208. ELFV_dehydrog. 1 hit. PF02812. ELFV_dehydrog_N. 1 hit. [Graphical view]
PIRSF	PIRSF000185. Glu_DH. 1 hit.
PRINTS	PR00082. GLFDHDRGNASE.
SMART	SM00839. ELFV_dehydrog. 1 hit. [Graphical view]
PROSITE	PS00074. GLFV_DEHYDROGENASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6AF05_LEIXX

Accession

Primary (citable) accession number: Q6AF05

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	December 14, 2011
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)