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Q6AEU4

- GLGB_LEIXX

UniProt

Q6AEU4 - GLGB_LEIXX

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Protein

1,4-alpha-glucan branching enzyme GlgB

Gene

glgB

Organism
Leifsonia xyli subsp. xyli (strain CTCB07)
Status
Reviewed - Annotation score: 3 out of 5- Protein inferred from homologyi

Functioni

Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position.UniRule annotation

Catalytic activityi

Transfers a segment of a (1->4)-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain.UniRule annotation

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei413 – 4131NucleophileUniRule annotation
Active sitei466 – 4661Proton donorUniRule annotation

GO - Molecular functioni

  1. 1,4-alpha-glucan branching enzyme activity Source: UniProtKB-HAMAP
  2. cation binding Source: InterPro
  3. hydrolase activity, hydrolyzing O-glycosyl compounds Source: InterPro

GO - Biological processi

  1. glycogen biosynthetic process Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Keywords - Biological processi

Carbohydrate metabolism, Glycogen biosynthesis, Glycogen metabolism

Enzyme and pathway databases

BioCyciLXYL281090:GH0X-1186-MONOMER.
UniPathwayiUPA00164.

Names & Taxonomyi

Protein namesi
Recommended name:
1,4-alpha-glucan branching enzyme GlgBUniRule annotation (EC:2.4.1.18UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferaseUniRule annotation
Alpha-(1->4)-glucan branching enzymeUniRule annotation
Glycogen branching enzymeUniRule annotation
Short name:
BEUniRule annotation
Gene namesi
Name:glgBUniRule annotation
Ordered Locus Names:Lxx12570
OrganismiLeifsonia xyli subsp. xyli (strain CTCB07)
Taxonomic identifieri281090 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeMicrobacteriaceaeLeifsonia
ProteomesiUP000001306: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7337331,4-alpha-glucan branching enzyme GlgBPRO_0000188713Add
BLAST

Interactioni

Subunit structurei

Monomer.UniRule annotation

Protein-protein interaction databases

STRINGi281090.Lxx12570.

Structurei

3D structure databases

ProteinModelPortaliQ6AEU4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.UniRule annotation

Phylogenomic databases

eggNOGiCOG0296.
HOGENOMiHOG000283037.
KOiK00700.
OMAiISEGRHE.
OrthoDBiEOG6JX7GT.

Family and domain databases

Gene3Di2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPiMF_00685. GlgB.
InterProiIPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view]
PIRSFiPIRSF000463. GlgB. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsiTIGR01515. branching_enzym. 1 hit.

Sequencei

Sequence statusi: Complete.

Q6AEU4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTPLPERAAA LPGIDDAVLH AVATGSYHDP HSVLGQHQVA AAGIADPVTV
60 70 80 90 100
IRTLRPLAEA VFAVLPTGAY LELAHLAHGI WQGVDIAGPG AYEIEARYAD
110 120 130 140 150
GSAWSADDPY RFLPTIGELD LHLIREGRHE RLWTALGARL RDLGGVTGTA
160 170 180 190 200
FTVWAPHARA VRVVGDFNGW DGTLHSLRNM GSSGVWELFV PGVGEGAIYK
210 220 230 240 250
FDLLAQSGDW VRKIDPMAQL AETPPDTASR IAVSRHEWQD GEWMRRRAAS
260 270 280 290 300
DPHTGPMSIY ELHFGSWRPD LGYREAADQL IDYLGALGYT HVEFLPLAEH
310 320 330 340 350
PFGGSWGYQV TGYYAPTSRF GSPDDLKYLI DRLHRAGIGV LLDWVPGHFP
360 370 380 390 400
KDDWALARFD GQPLYEHADP RRGEHADWGT YVFDYGNSQV RNFLVANALY
410 420 430 440 450
WLEEFHIDGL RVDAVASMLY LDYSRDADGW EPNIHGGREN LEAIAFLQEV
460 470 480 490 500
TATAYKRNPG TIVIAEESTS YPGVTAPTSS GGLGFGLKWN MGWMHDSLQY
510 520 530 540 550
IREDPLYRSW HHSRITFSFV YAWSESFLLP ISHDEVVHGK GSLLGKMPGD
560 570 580 590 600
HWQQLANMRA YLAFMWAHPG KQLLFMGQEF GQPSEWSEER GLDWWILDQP
610 620 630 640 650
AHRGLWNLVC ELNAVYRGAP ALWAHDNDPS GFEWLDGSDA AGNVLAFLRK
660 670 680 690 700
DGRGEPIAVI LNFSGAPHTE YRVGLPFAGG WEELLNTDAD VFGGSGVGNF
710 720 730
GGVTAVEEPW MGSPASAVLT LPPLGALFLK TGR
Length:733
Mass (Da):81,009
Last modified:September 13, 2004 - v1
Checksum:i3B8DB291AB0A525A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016822 Genomic DNA. Translation: AAT89101.1.
RefSeqiYP_062206.1. NC_006087.1.

Genome annotation databases

EnsemblBacteriaiAAT89101; AAT89101; Lxx12570.
GeneIDi2938397.
KEGGilxx:Lxx12570.
PATRICi22336109. VBILeiXyl11655_1303.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AE016822 Genomic DNA. Translation: AAT89101.1 .
RefSeqi YP_062206.1. NC_006087.1.

3D structure databases

ProteinModelPortali Q6AEU4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 281090.Lxx12570.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AAT89101 ; AAT89101 ; Lxx12570 .
GeneIDi 2938397.
KEGGi lxx:Lxx12570.
PATRICi 22336109. VBILeiXyl11655_1303.

Phylogenomic databases

eggNOGi COG0296.
HOGENOMi HOG000283037.
KOi K00700.
OMAi ISEGRHE.
OrthoDBi EOG6JX7GT.

Enzyme and pathway databases

UniPathwayi UPA00164 .
BioCyci LXYL281090:GH0X-1186-MONOMER.

Family and domain databases

Gene3Di 2.60.40.10. 2 hits.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
HAMAPi MF_00685. GlgB.
InterProi IPR006048. A-amylase_b_C.
IPR006407. GlgB.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR004193. Glyco_hydro_13_N.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF02922. CBM_48. 1 hit.
[Graphical view ]
PIRSFi PIRSF000463. GlgB. 1 hit.
SUPFAMi SSF51445. SSF51445. 1 hit.
SSF81296. SSF81296. 2 hits.
TIGRFAMsi TIGR01515. branching_enzym. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: CTCB07.

Entry informationi

Entry nameiGLGB_LEIXX
AccessioniPrimary (citable) accession number: Q6AEU4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 10, 2005
Last sequence update: September 13, 2004
Last modified: October 1, 2014
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3