Q6AEA6 (Q6AEA6_LEIXX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribonuclease RuleBase RU003515
EC=3.1.26.- RuleBase RU003515

Gene names

Name:	rnhB EMBL AAT89290.1
Ordered Locus Names:	Lxx14810

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP]

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Endonuclease that specifically degrades the RNA of RNA-DNA hybrids By similarity. RuleBase RU003515
Catalytic activity	Endonucleolytic cleavage to 5'-phosphomonoester. RuleBase RU003515
Sequence similarities	Belongs to the RNase HII family. RuleBase RU003515

Ontologies

Keywords
Molecular function	Endonuclease RuleBase RU003515 Hydrolase Nuclease
Technical term	Complete proteome
Gene Ontology (GO)
Molecular function	RNA binding Inferred from electronic annotation. Source: InterPro ribonuclease H activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6AEA6 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: 15C8CA0E47091E16	FASTA	226	24,118
	10 20 30 40 50 60 MTPVTPSLRF EKALYRQGVT SIVAVDEVGR GALAGPVAVG MVVIDTAVKR IPLGLRDSKL 70 80 90 100 110 120 LSEPAREALE PACRRWSLFH AVGLASADEV DRHGIMRCLG LAGARAFAVL EEQGAPVHDS 130 140 150 160 170 180 ALILDGNYDY LTLALTRPAR VVTRVKADRD CASVAAASVI AKVHRDRLMI EHDADDPGYG 190 200 210 220 WASNKGYSTP GHFAAIAELG PSAIHRLTWL KDGGRARHSD LTPGPA

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed: 15305603] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT89290.1.
RefSeq	YP_062395.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AEA6.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2939409.
GenomeReviews	Gene locus Lxx14810 in contig AE016822_GR.
KEGG	lxx:Lxx14810.
NMPDR	fig|281090.3.peg.301.
PATRIC	22336604. VBILeiXyl11655_1544.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG584843.
OMA	DGKHDYL.
ProtClustDB	PRK00015.
Family and domain databases
InterPro	IPR001352. RNase_HII/HIII. IPR024567. RNase_HII/HIII_dom. IPR012337. RNaseH-like_dom. [Graphical view]
KO	K03470.
PANTHER	PTHR10954. RNase_HII/HIII. 1 hit.
Pfam	PF01351. RNase_HII. 1 hit. [Graphical view]
SUPFAM	SSF53098. RNaseH_fold. 1 hit.
ProtoNet	Search...

Entry information

Entry name

Q6AEA6_LEIXX

Accession

Primary (citable) accession number: Q6AEA6

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	December 14, 2011
This is version 50 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)