Q6AE84 (Q6AE84_LEIXX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Cytochrome C oxidase subunit I EMBL AAT89312.1

Gene names

Name:	ctaD EMBL AAT89312.1
Ordered Locus Names:	Lxx15040

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP] EMBL AAT89312.1

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia › Leifsonia xyli › Leifsonia xyli subsp. xyli

Protein attributes

Sequence length	557 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the heme-copper respiratory oxidase family. RuleBase RU000370

Ontologies

Keywords
Biological process	Electron transport Respiratory chain RuleBase RU000370 Transport
Cellular component	Membrane
Domain	Transmembrane RuleBase RU000370
Ligand	Heme RuleBase RU000370 Iron Metal-binding
Molecular function	Oxidoreductase RuleBase RU000370
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	aerobic respiration Inferred from electronic annotation. Source: InterPro electron transport chain Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	integral to membrane Inferred from electronic annotation. Source: UniProtKB-KW plasma membrane Inferred from electronic annotation. Source: InterPro respiratory chain Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	copper ion binding Inferred from electronic annotation. Source: InterPro cytochrome-c oxidase activity Inferred from electronic annotation. Source: InterPro electron carrier activity Inferred from electronic annotation. Source: InterPro heme binding Inferred from electronic annotation. Source: InterPro iron ion binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6AE84 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: 6B7335AC27F904DA	FASTA	557	62,003
	10 20 30 40 50 60 MERKGNILVN YITSTDHKTI GYMYLISSFV YFLIGGVMAL IIRAQLFEPG LQVVATKEQY 70 80 90 100 110 120 NQLFTMHGTI MLLMFATPLF AGFANVLMPL QIGAPDVAFP RLNALAYWFY SFGSLIAVAG 130 140 150 160 170 180 FLTPQGAASF GWFAYAPLSS TTFSPGVGGN LWVLGLGLSG FGTILGAVNF IITIITMRAP 190 200 210 220 230 240 GMTMFRMPIF TWNTLVTSIL VLMAFPVLAA AMFALAADRV FDAHIYDAAN GGALLWQHLF 250 260 270 280 290 300 WFFGHPEVYI IALPFFGIVS EIFPVFSRKP IFGYKTLIYA TIAIAALSIT VWAHHMYVTG 310 320 330 340 350 360 SVLLPWFSLM TMLIAVPTGV KIFNWIGTMW RGSLTFESPM LWSIGFLITF TFGGLTGVIL 370 380 390 400 410 420 ASPPLDFHVS DTYFVVAHFH YVVFGTVVFA MFAGFYFWWP KWTGRMLNDR LGKWHFWLLF 430 440 450 460 470 480 IGFHMTFLVQ HWLGVVGMPR RYATYLPSDG FTWMNQLSSV GALLLAVSMI PFLVNVYLTA 490 500 510 520 530 540 RHAPKVTVND PWGYSRSLEW ATSCPPPRHN FTSIPRIRSE SPAFDLNHPE AGIPIGIGGG 550 KDAPDTPVLD LADNKVK

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT89312.1.
RefSeq	YP_062417.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AE84.
ModBase	Search...
Protein-protein interaction databases
STRING	281090.Lxx15040.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAT89312; AAT89312; Lxx15040.
GeneID	2940437.
KEGG	lxx:Lxx15040.
PATRIC	22336650. VBILeiXyl11655_1567.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000085275.
KO	K02274.
OMA	FLIGGIM.
ProtClustDB	CLSK2523264.
Enzyme and pathway databases
BioCyc	LXYL281090:GH0X-1445-MONOMER.
Family and domain databases
Gene3D	1.20.210.10. 1 hit.
InterPro	IPR000883. Cyt_c_Oxase_su1. IPR023615. Cyt_c_Oxase_su1_BS. IPR023616. Cyt_c_Oxase_su1_dom. IPR014241. Cyt_c_oxidase_su1_bac. [Graphical view]
PANTHER	PTHR10422. PTHR10422. 1 hit.
Pfam	PF00115. COX1. 1 hit. [Graphical view]
PRINTS	PR01165. CYCOXIDASEI.
SUPFAM	SSF81442. COX1. 1 hit.
TIGRFAMs	TIGR02891. CtaD_CoxA. 1 hit.
PROSITE	PS50855. COX1. 1 hit. PS00077. COX1_CUB. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6AE84_LEIXX

Accession

Primary (citable) accession number: Q6AE84

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	May 1, 2013
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)