Q6AD34 (Q6AD34_LEIXX) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Alanine racemase EMBL AAT89710.1

Gene names

Name:	alr EMBL AAT89710.1
Ordered Locus Names:	Lxx19950

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP] EMBL AAT89710.1

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia › Leifsonia xyli › Leifsonia xyli subsp. xyli

Protein attributes

Sequence length	372 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	Q6AD34 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: C8BB640AA257008F	FASTA	372	38,661
	10 20 30 40 50 60 MSAPFRELVV DLDAVSANVV RLRERAGTPH LMAVVKADAY GHGAVESACA ALAGGADWLG 70 80 90 100 110 120 VADLSEASQL RAAGIEAPLL AWLHDPDEDF VAAIAAGVDI GVSSLAHLEA AAAAGGGSPA 130 140 150 160 170 180 FVQLKLETGL SRNGLPEEQW EAVFARAHEL ERSGRIVVRG VFSHLSNASP AEDRAAIAAY 190 200 210 220 230 240 ERGLARAEAA GLAPELRHIA ASAAAISLPE ARFTLVRLGL AIYGLSPFGA ASATELGLRP 250 260 270 280 290 300 ALTLRARVAA VRRVPAGKGV SYDYTYRTER ETTLALVPVG YGDGLPRHAS NLGPVSIGGE 310 320 330 340 350 360 RFRVSGRIAM DQFVVDVGDA PVAVGDEVVL FGDPARGVPG ADDWAAAAET INYEIVTRLG 370 GRLRRTFRGG PA

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT89710.1.
RefSeq	YP_062815.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6AD34.
ModBase	Search...
Protein-protein interaction databases
STRING	281090.Lxx19950.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AAT89710; AAT89710; Lxx19950.
GeneID	2940269.
KEGG	lxx:Lxx19950.
PATRIC	22337666. VBILeiXyl11655_2070.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HOG000031444.
KO	K01775.
OMA	YRTERET.
ProtClustDB	CLSK831463.
Enzyme and pathway databases
BioCyc	LXYL281090:GH0X-1887-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Q6AD34_LEIXX

Accession

Primary (citable) accession number: Q6AD34

Entry history

Integrated into UniProtKB/TrEMBL:	September 13, 2004
Last sequence update:	September 13, 2004
Last modified:	May 1, 2013
This is version 71 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)