Q6ABX0 (RL9_LEIXX) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
50S ribosomal protein L9

Gene names

Name:	rplI
Ordered Locus Names:	Lxx25150

Organism

Leifsonia xyli subsp. xyli (strain CTCB07) [Complete proteome] [HAMAP]

Taxonomic identifier

281090 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Microbacteriaceae › Leifsonia

Protein attributes

Sequence length	150 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	Binds to the 23S rRNA By similarity. HAMAP MF_00503
Sequence similarities	Belongs to the ribosomal protein L9P family.

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding
Molecular function	Ribonucleoprotein Ribosomal protein
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	translation Inferred from electronic annotation. Source: InterPro
Cellular component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	rRNA binding Inferred from electronic annotation. Source: UniProtKB-KW structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 150	150	50S ribosomal protein L9 HAMAP MF_00503		PRO_0000232455

Sequences

	Sequence		Length	Mass (Da)
	Q6ABX0 [UniParc]. Last modified September 13, 2004. Version 1. Checksum: 858302AB47C5A316	FASTA	150	16,069
	10 20 30 40 50 60 MSKVILTHEV TGLGSAGDVV EVKDGYARNY LVPQGFAISW TRGGKKQVEQ IKAARAAREL 70 80 90 100 110 120 HSMEAAQELK AKLEATRVKL VVKAGREGRL FGSVKTADVA EAVKAAGIGE LDKRKIELPN 130 140 150 AIKAVGDHEA TVRLHEDLSA MITLQVVAAN

References

[1]

"The genome sequence of the Gram-positive sugarcane pathogen Leifsonia xyli subsp. xyli." Monteiro-Vitorello C.B., Camargo L.E.A., Van Sluys M.A., Kitajima J.P., Truffi D., do Amaral A.M., Harakava R., de Oliveira J.C.F., Wood D., de Oliveira M.C., Miyaki C.Y., Takita M.A., da Silva A.C.R., Furlan L.R., Carraro D.M., Camarotte G., Almeida N.F. Jr., Carrer H. , Coutinho L.L., El-Dorry H.A., Ferro M.I.T., Gagliardi P.R., Giglioti E., Goldman M.H.S., Goldman G.H., Kimura E.T., Ferro E.S., Kuramae E.E., Lemos E.G.M., Lemos M.V.F., Mauro S.M.Z., Machado M.A., Marino C.L., Menck C.F., Nunes L.R., Oliveira R.C., Pereira G.G., Siqueira W., de Souza A.A., Tsai S.M., Zanca A.S., Simpson A.J.G., Brumbley S.M., Setubal J.C. Mol. Plant Microbe Interact. 17:827-836(2004) [PubMed: 15305603] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: CTCB07.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE016822 Genomic DNA. Translation: AAT90122.1.
RefSeq	YP_063227.1. NC_006087.1.
3D structure databases
ProteinModelPortal	Q6ABX0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	2940487.
GenomeReviews	Gene locus Lxx25150 in contig AE016822_GR.
KEGG	lxx:Lxx25150.
NMPDR	fig|281090.3.peg.2014.
PATRIC	22338802. VBILeiXyl11655_2633.
Organism-specific databases
CMR	Search...
Phylogenomic databases
HOGENOM	HBG586587.
OMA	SGKLFGT.
ProtClustDB	PRK00137.
Enzyme and pathway databases
BioCyc	LXYL281090:LXX25150-MONOMER.
Family and domain databases
HAMAP	MF_00503. Ribosomal_L9. [Tree]
InterPro	IPR000244. Ribosomal_L9. IPR009027. Ribosomal_L9/RNase_H1_N. IPR020594. Ribosomal_L9_bac/chp. IPR020069. Ribosomal_L9_C. IPR020070. Ribosomal_L9_N. [Graphical view]
Gene3D	G3DSA:3.10.430.100. Ribosomal_L9. 1 hit. G3DSA:3.40.5.10. Ribosomal_L9. 1 hit.
KO	K02939.
PANTHER	PTHR21368. Ribosomal_L9. 1 hit.
Pfam	PF03948. Ribosomal_L9_C. 1 hit. PF01281. Ribosomal_L9_N. 1 hit. [Graphical view]
SUPFAM	SSF55658. L9_N_like. 1 hit. SSF55653. Ribosomal_L9. 1 hit.
TIGRFAMs	TIGR00158. L9. 1 hit.
PROSITE	PS00651. RIBOSOMAL_L9. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

RL9_LEIXX

Accession

Primary (citable) accession number: Q6ABX0

Entry history

Integrated into UniProtKB/Swiss-Prot:	April 18, 2006
Last sequence update:	September 13, 2004
Last modified:	January 25, 2012
This is version 41 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program