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Q69Z52 (Q69Z52_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 68. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:Grin3a MGI 1933206
Synonyms:mKIAA1973 EMBL BAD32592.1
OrganismMus musculus (Mouse) EMBL BAD32592.1
Taxonomic identifier10090 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus

Protein attributes

Sequence length1031 AA.
Sequence statusFragment.
Protein existenceEvidence at transcript level

Ontologies

Keywords
   Biological processIon transport
Transport
   Cellular componentCell junction
Cell membrane SAAS SAAS001320
Membrane
Postsynaptic cell membrane SAAS SAAS001320
Synapse
   DomainTransmembrane
Transmembrane helix SAAS SAAS001638
   Molecular functionIon channel
Ligand-gated ion channel SAAS SAAS001638
Receptor SAAS SAAS001638
Gene Ontology (GO)
   Biological_processcalcium ion transmembrane transport

Inferred from direct assay PubMed 9620802. Source: GOC

calcium ion transport

Inferred from mutant phenotype PubMed 14507892. Source: MGI

dendrite development

Inferred from mutant phenotype PubMed 9620802. Source: MGI

ion transmembrane transport

Inferred from Biological aspect of Ancestor. Source: GOC

ionotropic glutamate receptor signaling pathway

Inferred from mutant phenotype PubMed 14507892. Source: GOC

prepulse inhibition

Inferred from mutant phenotype PubMed 15866554. Source: MGI

synaptic transmission, glutamatergic

Inferred from Biological aspect of Ancestor. Source: RefGenome

   Cellular_componentN-methyl-D-aspartate selective glutamate receptor complex

Inferred from Biological aspect of Ancestor. Source: RefGenome

cell junction

Inferred from electronic annotation. Source: UniProtKB-KW

dendrite

Inferred from Biological aspect of Ancestor. Source: RefGenome

neuronal cell body

Inferred from direct assay PubMed 14507892. Source: MGI

postsynaptic membrane

Inferred from direct assay PubMed 9620802. Source: MGI

   Molecular_functionN-methyl-D-aspartate selective glutamate receptor activity

Inferred from mutant phenotype PubMed 14507892. Source: MGI

calcium channel activity

Inferred from direct assay PubMed 9620802. Source: MGI

extracellular-glutamate-gated ion channel activity

Inferred from Biological aspect of Ancestor. Source: RefGenome

protein binding

Inferred from physical interaction PubMed 9620802. Source: MGI

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Experimental info

Non-terminal residue11 EMBL BAD32592.1

Sequences

Sequence LengthMass (Da)Tools
Q69Z52 [UniParc].

Last modified September 13, 2004. Version 1.
Checksum: 81767ACCAAEDA79F

FASTA1,031116,392
        10         20         30         40         50         60 
RGPPGSRKLG EGAGTETLWP RDALLFAVEN LNRVEGLLPY NLSLEVVMAI EAGLGDLPLM 

        70         80         90        100        110        120 
PFSSPSSPWS SDPFSFLQSV CHTVVVQGVS ALLAFPQSQG EMMELDLVSS VLHIPVLSIV 

       130        140        150        160        170        180 
RHEFPRESQN PLHLQLSLEN SLSSDADVTV SILTMNNWYN FSLLLCQEDW NITDFLLLTE 

       190        200        210        220        230        240 
NNSKFHLESI INITANLSST KDLLSFLQVQ LENIRNSTPT MVMFGCDMGS IRQIFEMSTQ 

       250        260        270        280        290        300 
FGLSPPDLHW VLGDSQNVEE LRTEGLPLGL IAHGKTTQSV FEYYVQDAME LVARAVATAT 

       310        320        330        340        350        360 
MIQPELALLP STMNCMDVKT TNLTSGQYLS RFLANTTFRG LSGSIKVKGS TIVSSENNFF 

       370        380        390        400        410        420 
IWNLQYDPMG KPMWTRLGSW QGGRIVMDSG IWPEQAQRHK THFHHPNKLH LRVVTLIEHP 

       430        440        450        460        470        480 
FVFTREVDDE GLCPAGQLCL DPMTNDSSIL DSLFSSLHSS NDTVPIKFKK CCYGYCIDLL 

       490        500        510        520        530        540 
EQLAEDMNFD FDLYIVGDGK YGAWKNGHWT GLVGDLLSGT ANMAVTSFSI NTARSQVIDF 

       550        560        570        580        590        600 
TSPFFSTSLG ILVRTRDTAA PIGAFMWPLH WTMWLGIFVA LHITAIFLTL YEWKSPFGMT 

       610        620        630        640        650        660 
PKGRNRNKVF SFSSALNVCY ALLFGRTAAI KPPKCWTGRF LMNLWAIFCM FCLSTYTANL 

       670        680        690        700        710        720 
AAVMVGEKIY EELSGIHDPK LHHPSQGFRF GTVRESSAED YVRQSFPEMH EYMRRYNVPA 

       730        740        750        760        770        780 
TPDGVQYLKN DPEKLDAFIM DKALLDYEVS IDADCKLLTV GKPFAIEGYG IGLPPNSPLT 

       790        800        810        820        830        840 
SNISELISQY KSHGFMDVLH DKWYKVVPCG KRSFAVTETL QMGIKHFSGL FVLLCIGFGL 

       850        860        870        880        890        900 
SILTTIGEHI VYRLLLPRIK NKSKLQYWLH TSQRFHRALN TSFVEEKQPC SKTKRVEKSR 

       910        920        930        940        950        960 
WRRWTCKTEG DSELSLFPRS NMGPQQLMVW NTSNLSHDNQ RKYIFNDEEG QNQLGTQTHQ 

       970        980        990       1000       1010       1020 
DIPLPPRRRE LPASLTTNGK ADSLNVARNS VMQELSELEK QIQVIRQELQ LAVSRKTELE 

      1030 
EYQRTNRTCE S 

« Hide

References

[1]"Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries."
Okazaki N., Kikuno R., Ohara R., Inamoto S., Koseki H., Hiraoka S., Saga Y., Seino S., Nishimura M., Kaisho T., Hoshino K., Kitamura H., Nagase T., Ohara O., Koga H.
DNA Res. 11:205-218(2004) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Tissue: Fetal brain EMBL BAD32592.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AK173314 mRNA. Translation: BAD32592.1.
UniGeneMm.440095.

3D structure databases

ProteinModelPortalQ69Z52.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING10090.ENSMUSP00000091381.

Chemistry

BindingDBQ69Z52.

PTM databases

PhosphoSiteQ69Z52.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Organism-specific databases

MGIMGI:1933206. Grin3a.

Phylogenomic databases

HOVERGENHBG052634.
InParanoidQ69Z52.

Gene expression databases

ArrayExpressQ69Z52.
BgeeQ69Z52.
GenevestigatorQ69Z52.

Family and domain databases

InterProIPR019594. Glu_rcpt_Glu/Gly-bd.
IPR001320. Iontro_glu_rcpt.
IPR001508. NMDA_rcpt.
IPR028082. Peripla_BP_I.
IPR001638. SBP_bac_3.
[Graphical view]
PfamPF00060. Lig_chan. 1 hit.
PF00497. SBP_bac_3. 1 hit.
[Graphical view]
PRINTSPR00177. NMDARECEPTOR.
SMARTSM00918. Lig_chan-Glu_bd. 1 hit.
SM00079. PBPe. 1 hit.
[Graphical view]
SUPFAMSSF53822. SSF53822. 1 hit.
ProtoNetSearch...

Other

SOURCESearch...

Entry information

Entry nameQ69Z52_MOUSE
AccessionPrimary (citable) accession number: Q69Z52
Entry history
Integrated into UniProtKB/TrEMBL: September 13, 2004
Last sequence update: September 13, 2004
Last modified: June 11, 2014
This is version 68 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)