Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

Q69YG0

- TMM42_HUMAN

UniProt

Q69YG0 - TMM42_HUMAN

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein

Transmembrane protein 42

Gene

TMEM42

Organism
Homo sapiens (Human)
Status
Reviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Recommended name:
Transmembrane protein 42
Gene namesi
Name:TMEM42
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
ProteomesiUP000005640: Chromosome 3

Organism-specific databases

HGNCiHGNC:28444. TMEM42.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei37 – 5721HelicalSequence AnalysisAdd
BLAST
Transmembranei59 – 7921HelicalSequence AnalysisAdd
BLAST
Transmembranei100 – 12021HelicalSequence AnalysisAdd
BLAST
Transmembranei124 – 14421HelicalSequence AnalysisAdd
BLAST

GO - Cellular componenti

  1. integral component of membrane Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

PharmGKBiPA134914008.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 159159Transmembrane protein 42PRO_0000284495Add
BLAST

Proteomic databases

PaxDbiQ69YG0.
PRIDEiQ69YG0.

PTM databases

PhosphoSiteiQ69YG0.

Expressioni

Gene expression databases

BgeeiQ69YG0.
GenevestigatoriQ69YG0.

Organism-specific databases

HPAiHPA052569.

Structurei

3D structure databases

ProteinModelPortaliQ69YG0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiNOG16283.
GeneTreeiENSGT00390000012690.
HOGENOMiHOG000154645.
HOVERGENiHBG098258.
InParanoidiQ69YG0.
OMAiFGSEVNM.
OrthoDBiEOG78WKW2.
PhylomeDBiQ69YG0.
TreeFamiTF336306.

Sequencei

Sequence statusi: Complete.

Q69YG0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAERPGPPGG AVSATAYPDT PAEFPPHLQA GAMRRRFWGV FNCLCAGAFG
60 70 80 90 100
ALAAASAKLA FGSEVSMGLC VLGIIVMAST NSLMWTFFSR GLSFSMSSAI
110 120 130 140 150
ASVTVTFSNI LSSAFLGYVL YGECQEVLWW GGVFLILCGL TLIHRKLPPT

WKPLPHKQQ
Length:159
Mass (Da):16,991
Last modified:April 17, 2007 - v2
Checksum:iA8572BF4BC9CF44E
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Sequence conflicti65 – 651V → VV in CAH10689. (PubMed:17974005)Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL834253 mRNA. Translation: CAH10689.1.
BC019851 mRNA. Translation: AAH19851.1.
CCDSiCCDS2722.1.
RefSeqiNP_653239.1. NM_144638.1.
UniGeneiHs.646856.

Genome annotation databases

EnsembliENST00000302392; ENSP00000306564; ENSG00000169964.
GeneIDi131616.
KEGGihsa:131616.
UCSCiuc003cnz.3. human.

Polymorphism databases

DMDMi145572734.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL834253 mRNA. Translation: CAH10689.1 .
BC019851 mRNA. Translation: AAH19851.1 .
CCDSi CCDS2722.1.
RefSeqi NP_653239.1. NM_144638.1.
UniGenei Hs.646856.

3D structure databases

ProteinModelPortali Q69YG0.
ModBasei Search...
MobiDBi Search...

PTM databases

PhosphoSitei Q69YG0.

Polymorphism databases

DMDMi 145572734.

Proteomic databases

PaxDbi Q69YG0.
PRIDEi Q69YG0.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENST00000302392 ; ENSP00000306564 ; ENSG00000169964 .
GeneIDi 131616.
KEGGi hsa:131616.
UCSCi uc003cnz.3. human.

Organism-specific databases

CTDi 131616.
GeneCardsi GC03P044909.
H-InvDB HIX0200526.
HGNCi HGNC:28444. TMEM42.
HPAi HPA052569.
neXtProti NX_Q69YG0.
PharmGKBi PA134914008.
GenAtlasi Search...

Phylogenomic databases

eggNOGi NOG16283.
GeneTreei ENSGT00390000012690.
HOGENOMi HOG000154645.
HOVERGENi HBG098258.
InParanoidi Q69YG0.
OMAi FGSEVNM.
OrthoDBi EOG78WKW2.
PhylomeDBi Q69YG0.
TreeFami TF336306.

Miscellaneous databases

GenomeRNAii 131616.
NextBioi 82954.
PROi Q69YG0.

Gene expression databases

Bgeei Q69YG0.
Genevestigatori Q69YG0.

Family and domain databases

ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Testis.
  2. "The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
    The MGC Project Team
    Genome Res. 14:2121-2127(2004) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Tissue: Cervix.

Entry informationi

Entry nameiTMM42_HUMAN
AccessioniPrimary (citable) accession number: Q69YG0
Secondary accession number(s): Q8WUQ6
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 17, 2007
Last sequence update: April 17, 2007
Last modified: October 29, 2014
This is version 66 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 3
    Human chromosome 3: entries, gene names and cross-references to MIM

External Data

Dasty 3