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Q69VD9

- P2C57_ORYSJ

UniProt

Q69VD9 - P2C57_ORYSJ

Protein

Probable protein phosphatase 2C 57

Gene

Os06g0597200

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 79 (01 Oct 2014)
      Sequence version 1 (13 Sep 2004)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    [a protein]-serine/threonine phosphate + H2O = [a protein]-serine/threonine + phosphate.

    Cofactori

    Binds 2 magnesium or manganese ions per subunit.By similarity

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Metal bindingi111 – 1111Manganese 1By similarity
    Metal bindingi111 – 1111Manganese 2By similarity
    Metal bindingi112 – 1121Manganese 1; via carbonyl oxygenBy similarity
    Metal bindingi279 – 2791Manganese 2By similarity
    Metal bindingi322 – 3221Manganese 2By similarity

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein serine/threonine phosphatase activity Source: InterPro

    GO - Biological processi

    1. protein dephosphorylation Source: InterPro
    2. regulation of defense response to virus Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Hydrolase, Protein phosphatase

    Keywords - Ligandi

    Magnesium, Manganese, Metal-binding

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable protein phosphatase 2C 57 (EC:3.1.3.16)
    Short name:
    OsPP2C57
    Gene namesi
    Ordered Locus Names:Os06g0597200, LOC_Os06g39600
    ORF Names:P0417D05.18-1, P0417D05.18-2
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 6

    Organism-specific databases

    GrameneiQ69VD9.

    Subcellular locationi

    GO - Cellular componenti

    1. cytosol Source: EnsemblPlants/Gramene
    2. nucleus Source: EnsemblPlants/Gramene

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 367367Probable protein phosphatase 2C 57PRO_0000363304Add
    BLAST

    Proteomic databases

    PaxDbiQ69VD9.

    Structurei

    3D structure databases

    ProteinModelPortaliQ69VD9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Domains and Repeats

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Domaini66 – 324259PP2C-likeAdd
    BLAST

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi7 – 1711Poly-GlyAdd
    BLAST

    Sequence similaritiesi

    Belongs to the PP2C family.Curated
    Contains 1 PP2C-like domain.Curated

    Phylogenomic databases

    eggNOGiCOG0631.
    HOGENOMiHOG000233896.
    KOiK14803.
    OMAiWADIGSR.

    Family and domain databases

    Gene3Di3.60.40.10. 1 hit.
    InterProiIPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view]
    PANTHERiPTHR13832. PTHR13832. 1 hit.
    PfamiPF00481. PP2C. 1 hit.
    [Graphical view]
    SMARTiSM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view]
    SUPFAMiSSF81606. SSF81606. 1 hit.
    PROSITEiPS01032. PP2C. 1 hit.
    [Graphical view]

    Sequences (2)i

    Sequence statusi: Complete.

    This entry describes 2 isoformsi produced by alternative splicing. Align

    Isoform 1 (identifier: Q69VD9-1) [UniParc]FASTAAdd to Basket

    This isoform has been chosen as the 'canonical' sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

    « Hide

    MEEHRLGGGG GGGGGGGRPP IPGAAGRKLP GLSRHASFVR SPANSTKSGT    50
    EKTFENMDAV AYMPVVRSGG WADIGSRHTM EDVFICSDNL MKEFGVESFE 100
    DGPSAFYGVF DGHGGKHAAD FVCSNLARFI VEDEDFPREI EKALSSAFLQ 150
    TDAAFADACS VNSSLASGTT ALAALVVGRS LLVANAGDCR AVLCCRGKAI 200
    EMSRDHKPSC NREKVRIEAS GGYVYDGYLN GQLNVARAIG DWHMEGMKAC 250
    DGLGPLSAEP EVMIRNLTEE DEFLIIGCDG IWDVFRSQNA VDFARRKLQE 300
    HNDPVTCCKE LVDEAIKRKS GDNLSVVVIC FNSRPPPVLT TPRPRVQRSI 350
    SAEGLRELQS FLDSLAD 367
    Length:367
    Mass (Da):39,440
    Last modified:September 13, 2004 - v1
    Checksum:i0E0BDB6EDA142887
    GO
    Isoform 2 (identifier: Q69VD9-2) [UniParc]FASTAAdd to Basket

    The sequence of this isoform differs from the canonical sequence as follows:
         1-56: Missing.

    Note: No experimental confirmation available.

    Show »
    Length:311
    Mass (Da):33,914
    Checksum:i496C47C4D630A387
    GO

    Alternative sequence

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Alternative sequencei1 – 5656Missing in isoform 2. 1 PublicationVSP_036275Add
    BLAST

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004236 Genomic DNA. Translation: BAD33042.1.
    AP004236 Genomic DNA. Translation: BAD33043.1.
    AP008212 Genomic DNA. Translation: BAF19901.1.
    AK068472 mRNA. No translation available.
    AK070996 mRNA. Translation: BAG92252.1.
    RefSeqiNP_001057987.1. NM_001064522.1. [Q69VD9-1]
    UniGeneiOs.99809.

    Genome annotation databases

    EnsemblPlantsiOS06T0597200-01; OS06T0597200-01; OS06G0597200. [Q69VD9-1]
    GeneIDi4341433.
    KEGGiosa:4341433.

    Keywords - Coding sequence diversityi

    Alternative splicing

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP004236 Genomic DNA. Translation: BAD33042.1 .
    AP004236 Genomic DNA. Translation: BAD33043.1 .
    AP008212 Genomic DNA. Translation: BAF19901.1 .
    AK068472 mRNA. No translation available.
    AK070996 mRNA. Translation: BAG92252.1 .
    RefSeqi NP_001057987.1. NM_001064522.1. [Q69VD9-1 ]
    UniGenei Os.99809.

    3D structure databases

    ProteinModelPortali Q69VD9.
    ModBasei Search...
    MobiDBi Search...

    Proteomic databases

    PaxDbi Q69VD9.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS06T0597200-01 ; OS06T0597200-01 ; OS06G0597200 . [Q69VD9-1 ]
    GeneIDi 4341433.
    KEGGi osa:4341433.

    Organism-specific databases

    Gramenei Q69VD9.

    Phylogenomic databases

    eggNOGi COG0631.
    HOGENOMi HOG000233896.
    KOi K14803.
    OMAi WADIGSR.

    Family and domain databases

    Gene3Di 3.60.40.10. 1 hit.
    InterProi IPR001932. PP2C-like_dom.
    IPR000222. PP2C_Mn2_Asp60_BS.
    IPR015655. Protein_Pase_2C.
    [Graphical view ]
    PANTHERi PTHR13832. PTHR13832. 1 hit.
    Pfami PF00481. PP2C. 1 hit.
    [Graphical view ]
    SMARTi SM00331. PP2C_SIG. 1 hit.
    SM00332. PP2Cc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF81606. SSF81606. 1 hit.
    PROSITEi PS01032. PP2C. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
      The rice full-length cDNA consortium
      Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
      Strain: cv. Nipponbare.
    4. "Genome-wide and expression analysis of protein phosphatase 2C in rice and Arabidopsis."
      Xue T., Wang D., Zhang S., Ehlting J., Ni F., Jacab S., Zheng C., Zhong Y.
      BMC Genomics 9:550-550(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENE FAMILY, NOMENCLATURE.

    Entry informationi

    Entry nameiP2C57_ORYSJ
    AccessioniPrimary (citable) accession number: Q69VD9
    Secondary accession number(s): Q69VD8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 10, 2009
    Last sequence update: September 13, 2004
    Last modified: October 1, 2014
    This is version 79 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3