Q69SG5 (GUN24_ORYSJ) Reviewed, UniProtKB/Swiss-Prot
Last modified
December 14, 2011.
Version 43.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize orderNames and origin
| Protein names | Recommended name: Endoglucanase 24 EC=3.2.1.4 Alternative name(s): Endo-1,4-beta glucanase 24 | ||||
| Gene names |
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| Organism | Oryza sativa subsp. japonica (Rice) | ||||
| Taxonomic identifier | 39947 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › Liliopsida › Poales › Poaceae › BEP clade › Ehrhartoideae › Oryzeae › Oryza |
Protein attributes
| Sequence length | 528 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is further processed into a mature form. |
| Protein existence | Evidence at transcript level |
General annotation (Comments)
| Catalytic activity | Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans. |
| Subcellular location | Secreted By similarity. |
| Sequence similarities | Belongs to the glycosyl hydrolase 9 (cellulase E) family. |
Ontologies
| Keywords | |
|---|---|
| Biological process | Carbohydrate metabolism Cell wall biogenesis/degradation Cellulose degradation Polysaccharide degradation |
| Cellular component | Secreted |
| Domain | Signal |
| Molecular function | Glycosidase Hydrolase |
| PTM | Glycoprotein |
| Gene Ontology (GO) | |
| Biological process | cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW cellulose catabolic processInferred from electronic annotation. Source: UniProtKB-KW |
| Cellular component | extracellular region Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular function | cellulase activity Inferred from electronic annotation. Source: EC |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Molecule processing | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Signal peptide | 1 – 24 | 24 | Potential | ||||||
| Chain | 25 – 528 | 504 | Endoglucanase 24 | PRO_0000249301 | |||||
Sites | |||||||||
| Active site | 446 | 1 | By similarity | ||||||
| Active site | 492 | 1 | By similarity | ||||||
| Active site | 501 | 1 | By similarity | ||||||
Amino acid modifications | |||||||||
| Glycosylation | 259 | 1 | N-linked (GlcNAc...) Potential | ||||||
| Glycosylation | 487 | 1 | N-linked (GlcNAc...) Potential | ||||||
Sequences
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References
| « Hide 'large scale' references | |
| [1] | "The map-based sequence of the rice genome." International rice genome sequencing project (IRGSP) Nature 436:793-800(2005) [PubMed: 16100779] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: cv. Nipponbare. |
| [2] | "The rice annotation project database (RAP-DB): 2008 update." The rice annotation project (RAP) Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed: 18089549] [Abstract] Cited for: GENOME REANNOTATION. Strain: cv. Nipponbare. |
| [3] | "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice." The rice full-length cDNA consortium Science 301:376-379(2003) [PubMed: 12869764] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA]. Strain: cv. Nipponbare. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | AP005092 Genomic DNA. Translation: BAD33331.1. AP008215 Genomic DNA. Translation: BAF25685.1. AK100449 mRNA. Translation: BAG94612.1. |
| RefSeq | NP_001063771.1. NM_001070306.1. |
| UniGene | Os.6247. |
3D structure databases | |
| HSSP | HSSP built from PDB template 1TF4 based on UniProtKB P26221. |
| ProteinModelPortal | Q69SG5. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | Q69SG5. |
Protein family/group databases | |
| CAZy | GH9. Glycoside Hydrolase Family 9. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblPlants | LOC_Os09g36350.1; LOC_Os09g36350.1; LOC_Os09g36350. |
| GeneID | 4347685. |
| KEGG | osa:4347685. |
Organism-specific databases | |
| Gramene | Q69SG5. |
Phylogenomic databases | |
| GeneTree | EPGT00070000029310. |
| HOGENOM | HBG746347. |
| OMA | AGDHIKF. |
| PhylomeDB | Q69SG5. |
| ProtClustDB | PLN02345. |
Family and domain databases | |
| InterPro | IPR008928. 6-hairpin_glycosidase-like. IPR012341. 6hp_glycosidase. IPR001701. Glyco_hydro_9. [Graphical view] |
| Gene3D | G3DSA:1.50.10.10. CelA/Cel48F_cat. 1 hit. |
| Pfam | PF00759. Glyco_hydro_9. 1 hit. [Graphical view] |
| SUPFAM | SSF48208. Glyco_trans_6hp. 1 hit. |
| PROSITE | PS00592. GLYCOSYL_HYDROL_F9_1. False negative. PS00698. GLYCOSYL_HYDROL_F9_2. False negative. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | GUN24_ORYSJ | ||||||||
| Accession | Primary (citable) accession number: Q69SG5 Secondary accession number(s): Q0J030 | ||||||||
| Entry history |
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| Entry status | Reviewed (UniProtKB/Swiss-Prot) | ||||||||
| Annotation program | Plant Protein Annotation Program | ||||||||
Relevant documents
| Glycosyl hydrolases Classification of glycosyl hydrolase families and list of entries |
| Oryza sativa (rice) Index of Oryza sativa entries and their corresponding gene designations |
| SIMILARITY comments Index of protein domains and families |

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