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Protein

Endoglucanase 24

Gene

Os09g0533900

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei446 – 4461By similarity
Active sitei492 – 4921By similarity
Active sitei501 – 5011By similarity

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Cell wall biogenesis/degradation, Cellulose degradation, Polysaccharide degradation

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Names & Taxonomyi

Protein namesi
Recommended name:
Endoglucanase 24 (EC:3.2.1.4)
Alternative name(s):
Endo-1,4-beta glucanase 24
Gene namesi
Ordered Locus Names:Os09g0533900, LOC_Os09g36350
ORF Names:OJ1112_E07.17-1
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
ProteomesiUP000000763 Componenti: Chromosome 9

Organism-specific databases

GrameneiQ69SG5.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Secreted

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2424Sequence AnalysisAdd
BLAST
Chaini25 – 528504Endoglucanase 24PRO_0000249301Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Glycosylationi259 – 2591N-linked (GlcNAc...)Sequence Analysis
Glycosylationi487 – 4871N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Glycoprotein

Expressioni

Gene expression databases

ExpressionAtlasiQ69SG5. baseline.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g36350.1.

Structurei

3D structure databases

ProteinModelPortaliQ69SG5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiNOG328223.
HOGENOMiHOG000021033.
InParanoidiQ69SG5.
OMAiYMLSTRT.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q69SG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGSKTKGCCG WLIVALVASL VATAAVVAIM KKKVGGGSGR KLKPLPVPGP
60 70 80 90 100
PGAIDSKYGD ALGVALQFFQ VQKAGKLENN QIPWRGDSAL DDGKPAGLDL
110 120 130 140 150
SKGMYDAGDH IKFSFPMAFT ATVLSWSILE YGDQMSATKQ LDPALDALRW
160 170 180 190 200
ITDFLVNAHP SDNVFYIQVG DPDLDHNCWE RPETMSEKRP LTQINTKSPG
210 220 230 240 250
SDVAAEAAAA MASASIVFKS RDTTYSDSLL QHAQKLFTFA DTYKGLASDT
260 270 280 290 300
YPKLQNYYNS TGYQDELLWA ASWLYHATGD QTYLSYVTVE NGKAFADWGR
310 320 330 340 350
PTWFSWDDKL AGTQVLLSRL NFFGSKQTSN AENMGLKMYR DTAEAVICGL
360 370 380 390 400
LPDSPSATAS RTGGGLVWIS GWNSLQHATN AAFLAVVYSD YMLTSQTAAV
410 420 430 440 450
QCSGKYYSPT DIRNFAISQA NYILGDNPMK LSYLVGYGSS YPQQVHHRGA
460 470 480 490 500
SIPADAKTGC KGFQYLHSTS PNPNVAMGAL VGGPFQNDTF VDSRDNAVQT
510 520
ESSTYNSGTL VGLLSGLVTT SSVAQSFT
Length:528
Mass (Da):56,950
Last modified:September 13, 2004 - v1
Checksum:i1BB3653AD5047075
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005092 Genomic DNA. Translation: BAD33331.1.
AP008215 Genomic DNA. Translation: BAF25685.1.
AK100449 mRNA. Translation: BAG94612.1.
RefSeqiNP_001063771.1. NM_001070306.1.
UniGeneiOs.6247.

Genome annotation databases

EnsemblPlantsiOS09T0533900-01; OS09T0533900-01; OS09G0533900.
OS09T0533900-02; OS09T0533900-02; OS09G0533900.
GeneIDi4347685.
KEGGiosa:4347685.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005092 Genomic DNA. Translation: BAD33331.1.
AP008215 Genomic DNA. Translation: BAF25685.1.
AK100449 mRNA. Translation: BAG94612.1.
RefSeqiNP_001063771.1. NM_001070306.1.
UniGeneiOs.6247.

3D structure databases

ProteinModelPortaliQ69SG5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os09g36350.1.

Protein family/group databases

CAZyiGH9. Glycoside Hydrolase Family 9.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS09T0533900-01; OS09T0533900-01; OS09G0533900.
OS09T0533900-02; OS09T0533900-02; OS09G0533900.
GeneIDi4347685.
KEGGiosa:4347685.

Organism-specific databases

GrameneiQ69SG5.

Phylogenomic databases

eggNOGiNOG328223.
HOGENOMiHOG000021033.
InParanoidiQ69SG5.
OMAiYMLSTRT.

Gene expression databases

ExpressionAtlasiQ69SG5. baseline.

Family and domain databases

Gene3Di1.50.10.10. 1 hit.
InterProiIPR008928. 6-hairpin_glycosidase-like.
IPR012341. 6hp_glycosidase.
IPR001701. Glyco_hydro_9.
[Graphical view]
PfamiPF00759. Glyco_hydro_9. 1 hit.
[Graphical view]
SUPFAMiSSF48208. SSF48208. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
    Strain: cv. Nipponbare.

Entry informationi

Entry nameiGUN24_ORYSJ
AccessioniPrimary (citable) accession number: Q69SG5
Secondary accession number(s): Q0J030
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 5, 2006
Last sequence update: September 13, 2004
Last modified: July 22, 2015
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.