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Protein

Probable monogalactosyldiacylglycerol synthase 1, chloroplastic

Gene

MGD1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

Catalytic activityi

UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosyltransferase, Transferase

Protein family/group databases

CAZyiGT28. Glycosyltransferase Family 28.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable monogalactosyldiacylglycerol synthase 1, chloroplastic (EC:2.4.1.46)
Short name:
OsMGD1
Gene namesi
Name:MGD1
Ordered Locus Names:Os09g0423600, LOC_Os09g25580
ORF Names:OsJ_028264, OsJ_29413, P0418B08.19
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000059680 Componenti: Chromosome 9

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Membrane, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 109ChloroplastSequence analysisAdd BLAST109
ChainiPRO_0000349427110 – 535Probable monogalactosyldiacylglycerol synthase 1, chloroplasticAdd BLAST426

Proteomic databases

PaxDbiQ69QJ7.

Expressioni

Gene expression databases

GenevisibleiQ69QJ7. OS.

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g25580.1.

Structurei

3D structure databases

ProteinModelPortaliQ69QJ7.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Compositional bias

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Compositional biasi3 – 73Ala-richAdd BLAST71
Compositional biasi15 – 52Pro-richAdd BLAST38
Compositional biasi98 – 130Gly-richAdd BLAST33

Sequence similaritiesi

Belongs to the glycosyltransferase 28 family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IG4I. Eukaryota.
COG0707. LUCA.
HOGENOMiHOG000239591.
InParanoidiQ69QJ7.
KOiK03715.
OMAiWGEFARF.
OrthoDBiEOG09360AEE.

Family and domain databases

InterProiIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q69QJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAPTASSLA AAADPALPAA FLSLPSPLLP ASPPLPAAPA PSSNAFCVPR
60 70 80 90 100
GPARAVAVSV SVSAYGAGST AAASRLHRMW AEFSRFVRLH GNQIAPLGFA
110 120 130 140 150
SLGLGVGGGG GGSGEGAGGG GGGGGGEVDG LVEEEGVARA EAPKKVLILM
160 170 180 190 200
SDTGGGHRAS AEAIKAAFIQ EFGDDYQVFV TDLWTDHTPW PFNQLPRSYS
210 220 230 240 250
FLVKHGPLWK MTYYGTAPRV VHQPHFAATS TFIAREVAKG LMKYQPDVII
260 270 280 290 300
SVHPLMQHVP LRILRSKGLL DKIPFTTVVT DLSTCHPTWF HKLVTRCYCP
310 320 330 340 350
SAEVSKRALK AGLQPSQIKV YGLPVRPSFV KPIRPEDELR RELGMDEYLP
360 370 380 390 400
AVLLMGGGEG MGPIEATARA LGDALYDEVL GEPTGQILVI CGRNKKLTSR
410 420 430 440 450
LQSINWKVPV QVKGFVTKME ECMGACDCII TKAGPGTIAE AMIRGLPIIL
460 470 480 490 500
NGYIAGQEAG NVPYVVDNGC GKFSKSPEQI AKIVADWFGP RSDELKMMSQ
510 520 530
NALKLARPDA VFKIVHDLHE LVRQKCFVPQ YACAS
Length:535
Mass (Da):56,925
Last modified:September 13, 2004 - v1
Checksum:i454631F540426A72
GO

Sequence cautioni

The sequence BAF25127 differs from that shown. Reason: Erroneous gene model prediction.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005420 Genomic DNA. Translation: BAD33425.1.
AP008215 Genomic DNA. Translation: BAF25127.2. Sequence problems.
AP014965 Genomic DNA. Translation: BAT08147.1.
CM000146 Genomic DNA. Translation: EEE69729.1.
AK243359 mRNA. Translation: BAH01559.1.
RefSeqiXP_015611851.1. XM_015756365.1.
UniGeneiOs.11912.

Genome annotation databases

EnsemblPlantsiOS09T0423600-01; OS09T0423600-01; OS09G0423600.
GeneIDi4347099.
GrameneiOS09T0423600-01; OS09T0423600-01; OS09G0423600.
KEGGiosa:4347099.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005420 Genomic DNA. Translation: BAD33425.1.
AP008215 Genomic DNA. Translation: BAF25127.2. Sequence problems.
AP014965 Genomic DNA. Translation: BAT08147.1.
CM000146 Genomic DNA. Translation: EEE69729.1.
AK243359 mRNA. Translation: BAH01559.1.
RefSeqiXP_015611851.1. XM_015756365.1.
UniGeneiOs.11912.

3D structure databases

ProteinModelPortaliQ69QJ7.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi39947.LOC_Os09g25580.1.

Protein family/group databases

CAZyiGT28. Glycosyltransferase Family 28.

Proteomic databases

PaxDbiQ69QJ7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiOS09T0423600-01; OS09T0423600-01; OS09G0423600.
GeneIDi4347099.
GrameneiOS09T0423600-01; OS09T0423600-01; OS09G0423600.
KEGGiosa:4347099.

Phylogenomic databases

eggNOGiENOG410IG4I. Eukaryota.
COG0707. LUCA.
HOGENOMiHOG000239591.
InParanoidiQ69QJ7.
KOiK03715.
OMAiWGEFARF.
OrthoDBiEOG09360AEE.

Gene expression databases

GenevisibleiQ69QJ7. OS.

Family and domain databases

InterProiIPR009695. Diacylglyc_glucosyltr_N.
IPR007235. Glyco_trans_28_C.
[Graphical view]
PfamiPF04101. Glyco_tran_28_C. 1 hit.
PF06925. MGDG_synth. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiMGDG1_ORYSJ
AccessioniPrimary (citable) accession number: Q69QJ7
Secondary accession number(s): A0A0P0XNP2, B7FAB1, Q0J1N8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: September 2, 2008
Last sequence update: September 13, 2004
Last modified: November 30, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.