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Q69QJ7

- MGDG1_ORYSJ

UniProt

Q69QJ7 - MGDG1_ORYSJ

Protein

Probable monogalactosyldiacylglycerol synthase 1, chloroplastic

Gene

MGD1

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 3 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 58 (01 Oct 2014)
      Sequence version 1 (13 Sep 2004)
      Previous versions | rss
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    Functioni

    Involved in the synthesis of the major structural component of photosynthetic membranes.By similarity

    Catalytic activityi

    UDP-alpha-D-galactose + 1,2-diacyl-sn-glycerol = UDP + 3-beta-D-galactosyl-1,2-diacyl-sn-glycerol.

    GO - Molecular functioni

    1. 1,2-diacylglycerol 3-beta-galactosyltransferase activity Source: UniProtKB-EC
    2. carbohydrate binding Source: InterPro

    GO - Biological processi

    1. embryo development Source: EnsemblPlants/Gramene
    2. glycolipid biosynthetic process Source: InterPro
    3. lipid glycosylation Source: InterPro
    4. thylakoid membrane organization Source: EnsemblPlants/Gramene

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Protein family/group databases

    CAZyiGT28. Glycosyltransferase Family 28.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Probable monogalactosyldiacylglycerol synthase 1, chloroplastic (EC:2.4.1.46)
    Short name:
    OsMGD1
    Gene namesi
    Name:MGD1
    Ordered Locus Names:Os09g0423600, LOC_Os09g25580
    ORF Names:OsJ_028264, OsJ_29413, P0418B08.19
    OrganismiOryza sativa subsp. japonica (Rice)
    Taxonomic identifieri39947 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
    ProteomesiUP000000763: Chromosome 9

    Organism-specific databases

    GrameneiQ69QJ7.

    Subcellular locationi

    GO - Cellular componenti

    1. chloroplast membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Chloroplast, Membrane, Plastid

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transit peptidei1 – 109109ChloroplastSequence AnalysisAdd
    BLAST
    Chaini110 – 535426Probable monogalactosyldiacylglycerol synthase 1, chloroplasticPRO_0000349427Add
    BLAST

    Proteomic databases

    PaxDbiQ69QJ7.

    Interactioni

    Protein-protein interaction databases

    STRINGi39947.LOC_Os09g25580.1.

    Structurei

    3D structure databases

    ProteinModelPortaliQ69QJ7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Compositional bias

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Compositional biasi3 – 7371Ala-richAdd
    BLAST
    Compositional biasi15 – 5238Pro-richAdd
    BLAST
    Compositional biasi98 – 13033Gly-richAdd
    BLAST

    Sequence similaritiesi

    Belongs to the glycosyltransferase 28 family.Curated

    Keywords - Domaini

    Transit peptide

    Phylogenomic databases

    eggNOGiCOG0707.
    HOGENOMiHOG000239591.
    KOiK03715.
    OMAiGNQIAPL.

    Family and domain databases

    InterProiIPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view]
    PfamiPF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    Q69QJ7-1 [UniParc]FASTAAdd to Basket

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    MPAPTASSLA AAADPALPAA FLSLPSPLLP ASPPLPAAPA PSSNAFCVPR    50
    GPARAVAVSV SVSAYGAGST AAASRLHRMW AEFSRFVRLH GNQIAPLGFA 100
    SLGLGVGGGG GGSGEGAGGG GGGGGGEVDG LVEEEGVARA EAPKKVLILM 150
    SDTGGGHRAS AEAIKAAFIQ EFGDDYQVFV TDLWTDHTPW PFNQLPRSYS 200
    FLVKHGPLWK MTYYGTAPRV VHQPHFAATS TFIAREVAKG LMKYQPDVII 250
    SVHPLMQHVP LRILRSKGLL DKIPFTTVVT DLSTCHPTWF HKLVTRCYCP 300
    SAEVSKRALK AGLQPSQIKV YGLPVRPSFV KPIRPEDELR RELGMDEYLP 350
    AVLLMGGGEG MGPIEATARA LGDALYDEVL GEPTGQILVI CGRNKKLTSR 400
    LQSINWKVPV QVKGFVTKME ECMGACDCII TKAGPGTIAE AMIRGLPIIL 450
    NGYIAGQEAG NVPYVVDNGC GKFSKSPEQI AKIVADWFGP RSDELKMMSQ 500
    NALKLARPDA VFKIVHDLHE LVRQKCFVPQ YACAS 535
    Length:535
    Mass (Da):56,925
    Last modified:September 13, 2004 - v1
    Checksum:i454631F540426A72
    GO

    Sequence cautioni

    The sequence BAF25127.2 differs from that shown. Reason: Erroneous gene model prediction.

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005420 Genomic DNA. Translation: BAD33425.1.
    AP008215 Genomic DNA. Translation: BAF25127.2. Sequence problems.
    CM000146 Genomic DNA. Translation: EEE69729.1.
    AK243359 mRNA. Translation: BAH01559.1.
    RefSeqiNP_001063213.2. NM_001069748.2.
    UniGeneiOs.11912.

    Genome annotation databases

    EnsemblPlantsiOS09T0423600-01; OS09T0423600-01; OS09G0423600.
    GeneIDi4347099.
    KEGGiosa:4347099.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP005420 Genomic DNA. Translation: BAD33425.1 .
    AP008215 Genomic DNA. Translation: BAF25127.2 . Sequence problems.
    CM000146 Genomic DNA. Translation: EEE69729.1 .
    AK243359 mRNA. Translation: BAH01559.1 .
    RefSeqi NP_001063213.2. NM_001069748.2.
    UniGenei Os.11912.

    3D structure databases

    ProteinModelPortali Q69QJ7.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 39947.LOC_Os09g25580.1.

    Protein family/group databases

    CAZyi GT28. Glycosyltransferase Family 28.

    Proteomic databases

    PaxDbi Q69QJ7.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi OS09T0423600-01 ; OS09T0423600-01 ; OS09G0423600 .
    GeneIDi 4347099.
    KEGGi osa:4347099.

    Organism-specific databases

    Gramenei Q69QJ7.

    Phylogenomic databases

    eggNOGi COG0707.
    HOGENOMi HOG000239591.
    KOi K03715.
    OMAi GNQIAPL.

    Family and domain databases

    InterProi IPR009695. Diacylglyc_glucosyltr_N.
    IPR007235. Glyco_trans_28_C.
    [Graphical view ]
    Pfami PF04101. Glyco_tran_28_C. 1 hit.
    PF06925. MGDG_synth. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    2. "The rice annotation project database (RAP-DB): 2008 update."
      The rice annotation project (RAP)
      Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
      Cited for: GENOME REANNOTATION.
      Strain: cv. Nipponbare.
    3. "The genomes of Oryza sativa: a history of duplications."
      Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
      , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
      PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. Nipponbare.
    4. "Oryza sativa full-length cDNA."
      The rice full-length cDNA consortium
      Submitted (OCT-2006) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
      Strain: cv. Nipponbare.

    Entry informationi

    Entry nameiMGDG1_ORYSJ
    AccessioniPrimary (citable) accession number: Q69QJ7
    Secondary accession number(s): B7FAB1, Q0J1N8
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: September 2, 2008
    Last sequence update: September 13, 2004
    Last modified: October 1, 2014
    This is version 58 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programPlant Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Oryza sativa (rice)
      Index of Oryza sativa entries and their corresponding gene designations
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3