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Protein

Probable 6-phosphogluconolactonase 4, chloroplastic

Gene

Os09g0529100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi: pentose phosphate pathway

This protein is involved in step 2 of the subpathway that synthesizes D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage).
Proteins known to be involved in the 3 steps of the subpathway in this organism are:
  1. Glucose-6-phosphate 1-dehydrogenase (LOC_Os03g29950), Glucose-6-phosphate 1-dehydrogenase (OsJ_23916), Glucose-6-phosphate 1-dehydrogenase (Os02g0600400), Glucose-6-phosphate 1-dehydrogenase (P0613B07.138), Glucose-6-phosphate 1-dehydrogenase (pG6PDH), Glucose-6-phosphate 1-dehydrogenase (Os04g0485300), Glucose-6-phosphate 1-dehydrogenase (Os03g0318500), Glucose-6-phosphate 1-dehydrogenase (g6pdh), Glucose-6-phosphate 1-dehydrogenase (LOC_Os03g29950)
  2. Probable 6-phosphogluconolactonase 1 (Os03g0416500), Probable 6-phosphogluconolactonase 4, chloroplastic (Os09g0529100), Probable 6-phosphogluconolactonase 3, chloroplastic (Os08g0547100), Probable 6-phosphogluconolactonase 2 (Os07g0604000)
  3. 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic (G6PGH2), 6-phosphogluconate dehydrogenase, decarboxylating (P0029D06.14-2), 6-phosphogluconate dehydrogenase, decarboxylating (Os06g0111500), 6-phosphogluconate dehydrogenase, decarboxylating (OsJ_33909), 6-phosphogluconate dehydrogenase, decarboxylating 1 (G6PGH1)
This subpathway is part of the pathway pentose phosphate pathway, which is itself part of Carbohydrate degradation.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes D-ribulose 5-phosphate from D-glucose 6-phosphate (oxidative stage), the pathway pentose phosphate pathway and in Carbohydrate degradation.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolase

Enzyme and pathway databases

ReactomeiR-OSA-71336 Pentose phosphate pathway (hexose monophosphate shunt)
UniPathwayiUPA00115; UER00409

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 4, chloroplastic (EC:3.1.1.31)
Short name:
6PGL 4
Gene namesi
Ordered Locus Names:Os09g0529100, LOC_Os09g35970
ORF Names:OJ1531_B07.11, OsJ_028924
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryzaOryza sativa
Proteomesi
  • UP000059680 Componenti: Chromosome 9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 63ChloroplastSequence analysisAdd BLAST63
ChainiPRO_000028868064 – 324Probable 6-phosphogluconolactonase 4, chloroplasticAdd BLAST261

Proteomic databases

PaxDbiQ69NG5
PRIDEiQ69NG5

Expressioni

Gene expression databases

ExpressionAtlasiQ69NG5 differential
GenevisibleiQ69NG5 OS

Interactioni

Protein-protein interaction databases

STRINGi39947.LOC_Os09g35970.1

Structurei

3D structure databases

ProteinModelPortaliQ69NG5
SMRiQ69NG5
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiKOG3147 Eukaryota
COG0363 LUCA
InParanoidiQ69NG5
KOiK01057

Family and domain databases

CDDicd01400 6PGL, 1 hit
InterProiView protein in InterPro
IPR005900 6-phosphogluconolactonase_DevB
IPR006148 Glc/Gal-6P_isomerase
IPR037171 NagB/RpiA_transferase-like
PfamiView protein in Pfam
PF01182 Glucosamine_iso, 1 hit
SUPFAMiSSF100950 SSF100950, 1 hit
TIGRFAMsiTIGR01198 pgl, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q69NG5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSVSAAVAAA STSRTLVLAR HRSPPASRVA ATSRGRPFSS GPHPLAVSPA
60 70 80 90 100
TRAPAMATDG AAAAAAAGSK KKKEVLIFDA EEDLAVSLAK YTAELSAKLA
110 120 130 140 150
AERGAFTVVL SGGSLIKNIR KLAEPPYLDS VDWSKWHVFW VDERVVPKDH
160 170 180 190 200
EDSNYKLALD GFLSKVPIPT GQVYAINDAL SAEGAADDYE TCLKQLVKNG
210 220 230 240 250
VIAMSQSTGF PRFDVMLLGM GPDGHIASLF PGHPLVNENK KWVTYIKDSP
260 270 280 290 300
KPPPERITFT FPVINSSAYV AMVVTGAGKA GAVQKALSDK QTSSDLLPVE
310 320
MAVLQDGEFT WFTDKPAVSM LQNK
Length:324
Mass (Da):34,496
Last modified:May 29, 2007 - v2
Checksum:i113DB6F47B1539CE
GO

Sequence cautioni

The sequence BAD33762 differs from that shown. Reason: Erroneous initiation.Curated
The sequence BAF25655 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005682 Genomic DNA Translation: BAD33762.1 Different initiation.
AP008215 Genomic DNA Translation: BAF25655.1 Different initiation.
AP014965 Genomic DNA No translation available.
CM000146 Genomic DNA No translation available.
AK069696 mRNA No translation available.
RefSeqiXP_015612582.1, XM_015757096.1
UniGeneiOs.17852

Genome annotation databases

EnsemblPlantsiOs09t0529100-01; Os09t0529100-01; Os09g0529100
GeneIDi4347654
GrameneiOs09t0529100-01; Os09t0529100-01; Os09g0529100
KEGGiosa:4347654

Similar proteinsi

Entry informationi

Entry namei6PGL4_ORYSJ
AccessioniPrimary (citable) accession number: Q69NG5
Secondary accession number(s): A3C0V2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 29, 2007
Last modified: May 23, 2018
This is version 88 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

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