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Q69NG5

- 6PGL4_ORYSJ

UniProt

Q69NG5 - 6PGL4_ORYSJ

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Protein

Probable 6-phosphogluconolactonase 4, chloroplastic

Gene

Os09g0529100

Organism
Oryza sativa subsp. japonica (Rice)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli

Functioni

Hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate.By similarity

Catalytic activityi

6-phospho-D-glucono-1,5-lactone + H2O = 6-phospho-D-gluconate.

Pathwayi

GO - Molecular functioni

  1. 6-phosphogluconolactonase activity Source: UniProtKB-EC

GO - Biological processi

  1. pentose-phosphate shunt Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

Hydrolase

Enzyme and pathway databases

ReactomeiREACT_252555. Pentose phosphate pathway (hexose monophosphate shunt).
UniPathwayiUPA00115; UER00409.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable 6-phosphogluconolactonase 4, chloroplastic (EC:3.1.1.31)
Short name:
6PGL 4
Gene namesi
Ordered Locus Names:Os09g0529100, LOC_Os09g35970
ORF Names:OJ1531_B07.11, OsJ_028924
OrganismiOryza sativa subsp. japonica (Rice)
Taxonomic identifieri39947 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBEP cladeEhrhartoideaeOryzeaeOryza
ProteomesiUP000000763: Chromosome 9

Organism-specific databases

GrameneiQ69NG5.

Subcellular locationi

Plastidchloroplast Curated

GO - Cellular componenti

  1. chloroplast Source: UniProtKB-KW
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transit peptidei1 – 6363ChloroplastSequence AnalysisAdd
BLAST
Chaini64 – 324261Probable 6-phosphogluconolactonase 4, chloroplasticPRO_0000288680Add
BLAST

Expressioni

Gene expression databases

ExpressionAtlasiQ69NG5. baseline.

Structurei

3D structure databases

ProteinModelPortaliQ69NG5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiCOG0363.
InParanoidiQ69NG5.
KOiK01057.
OMAiGEFTWFT.

Family and domain databases

InterProiIPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view]
PfamiPF01182. Glucosamine_iso. 1 hit.
[Graphical view]
TIGRFAMsiTIGR01198. pgl. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q69NG5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSVSAAVAAA STSRTLVLAR HRSPPASRVA ATSRGRPFSS GPHPLAVSPA
60 70 80 90 100
TRAPAMATDG AAAAAAAGSK KKKEVLIFDA EEDLAVSLAK YTAELSAKLA
110 120 130 140 150
AERGAFTVVL SGGSLIKNIR KLAEPPYLDS VDWSKWHVFW VDERVVPKDH
160 170 180 190 200
EDSNYKLALD GFLSKVPIPT GQVYAINDAL SAEGAADDYE TCLKQLVKNG
210 220 230 240 250
VIAMSQSTGF PRFDVMLLGM GPDGHIASLF PGHPLVNENK KWVTYIKDSP
260 270 280 290 300
KPPPERITFT FPVINSSAYV AMVVTGAGKA GAVQKALSDK QTSSDLLPVE
310 320
MAVLQDGEFT WFTDKPAVSM LQNK
Length:324
Mass (Da):34,496
Last modified:May 29, 2007 - v2
Checksum:i113DB6F47B1539CE
GO

Sequence cautioni

The sequence BAD33762.1 differs from that shown. Reason: Erroneous initiation. Curated
The sequence BAF25655.1 differs from that shown. Reason: Erroneous initiation. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005682 Genomic DNA. Translation: BAD33762.1. Different initiation.
AP008215 Genomic DNA. Translation: BAF25655.1. Different initiation.
CM000146 Genomic DNA. No translation available.
AK069696 mRNA. No translation available.
RefSeqiNP_001063741.1. NM_001070276.1.
UniGeneiOs.17852.

Genome annotation databases

GeneIDi4347654.
KEGGiosa:4347654.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP005682 Genomic DNA. Translation: BAD33762.1 . Different initiation.
AP008215 Genomic DNA. Translation: BAF25655.1 . Different initiation.
CM000146 Genomic DNA. No translation available.
AK069696 mRNA. No translation available.
RefSeqi NP_001063741.1. NM_001070276.1.
UniGenei Os.17852.

3D structure databases

ProteinModelPortali Q69NG5.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

GeneIDi 4347654.
KEGGi osa:4347654.

Organism-specific databases

Gramenei Q69NG5.

Phylogenomic databases

eggNOGi COG0363.
InParanoidi Q69NG5.
KOi K01057.
OMAi GEFTWFT.

Enzyme and pathway databases

UniPathwayi UPA00115 ; UER00409 .
Reactomei REACT_252555. Pentose phosphate pathway (hexose monophosphate shunt).

Gene expression databases

ExpressionAtlasi Q69NG5. baseline.

Family and domain databases

InterProi IPR005900. 6-phosphogluconolactonase_DevB.
IPR006148. Glc/Gal-6P_isomerase.
[Graphical view ]
Pfami PF01182. Glucosamine_iso. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR01198. pgl. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  2. "The rice annotation project database (RAP-DB): 2008 update."
    The rice annotation project (RAP)
    Nucleic Acids Res. 36:D1028-D1033(2008) [PubMed] [Europe PMC] [Abstract]
    Cited for: GENOME REANNOTATION.
    Strain: cv. Nipponbare.
  3. "The genomes of Oryza sativa: a history of duplications."
    Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S., Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.
    , Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J., Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X., Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y., Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L., Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H., Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z., Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L., Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F., Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q., Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J., Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M., McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.
    PLoS Biol. 3:266-281(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Nipponbare.
  4. "Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice."
    The rice full-length cDNA consortium
    Science 301:376-379(2003) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 3-324.
    Strain: cv. Nipponbare.

Entry informationi

Entry namei6PGL4_ORYSJ
AccessioniPrimary (citable) accession number: Q69NG5
Secondary accession number(s): A3C0V2
Entry historyi
Integrated into UniProtKB/Swiss-Prot: May 29, 2007
Last sequence update: May 29, 2007
Last modified: November 26, 2014
This is version 67 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. Oryza sativa (rice)
    Index of Oryza sativa entries and their corresponding gene designations
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3